Prunus avium (prunus_avium)
Imported from atlas release summary for Prunus avium.
1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1762
Candidate Genes
C4H
7.03%
BAHD
5.97%
UGT
5.8%
C3'H/CYP98A
5.49%
7DLGT
4.31%
CYP76
4.12%
IFS
4.04%
UFGT
3.92%
Other Families
59.33%
More Families (96)
POD
119
2.86%
T3O
118
2.84%
F3H
113
2.72%
4CL
108
2.6%
DWF4/CYP90B1
86
2.07%
NMT
76
1.83%
CAD
75
1.81%
H6H
73
1.76%
STR
64
1.54%
CODM/T6ODM
61
1.47%
F3'H/CYP75B
61
1.47%
BR6OX2/CYP85A2
61
1.47%
SGD
58
1.4%
HCT
56
1.35%
GS
55
1.32%
TAT
53
1.28%
TPS
51
1.23%
G8O/G8H
49
1.18%
T16H
48
1.16%
GES
44
1.06%
CAS
43
1.03%
CSE
42
1.01%
LAC
41
0.99%
CYP71
38
0.91%
TRI/TRII
37
0.89%
BBE
37
0.89%
FNS
36
0.87%
CYP90D1
36
0.87%
COMT
35
0.84%
IO
33
0.79%
7DLH
33
0.79%
RAS
33
0.79%
SMT1/SMT2/SMT3
32
0.77%
CCR
28
0.67%
NCS
27
0.65%
ANR
26
0.63%
IFR
26
0.63%
PMT
24
0.58%
F3'5'H/CYP75A
23
0.55%
BR6OX1/CYP85A1
22
0.53%
16OMT
21
0.51%
LAMT
21
0.51%
F5H/CYP84A
21
0.51%
PYKS
18
0.43%
DFR
18
0.43%
CPD/CYP90A1
16
0.39%
COR
15
0.36%
SLS
14
0.34%
8HGO
14
0.34%
ANS/LDOX
12
0.29%
DWF7
12
0.29%
CCoAOMT
11
0.26%
CYP51G1
11
0.26%
ROT3/CYP90C1
10
0.24%
ISY
9
0.22%
PAL
9
0.22%
SQE
9
0.22%
MPO
8
0.19%
6OMT_4OMT_SOMT
7
0.17%
CNMT
7
0.17%
CYP80B1
7
0.17%
TYDC_DDC
6
0.14%
CHS
6
0.14%
FLS
6
0.14%
CPR
6
0.14%
AACT
6
0.14%
FPPS
6
0.14%
HPPR
5
0.12%
GGPPS
5
0.12%
ODC
4
0.1%
XMT_MXMT_DXMT
4
0.1%
CHI
4
0.1%
DET2
4
0.1%
SQS/FDFT1
4
0.1%
HMGR
4
0.1%
DXS
4
0.1%
CYP719
3
0.07%
SMO1/SMO2
3
0.07%
MVD
3
0.07%
MVK
3
0.07%
PMK
3
0.07%
MCT/IspD
3
0.07%
CYP80F1
2
0.05%
TDC
2
0.05%
HYD1
2
0.05%
DWF5
2
0.05%
FK
2
0.05%
DXR
2
0.05%
HDR/IspH
2
0.05%
MDS/IspF
2
0.05%
ADC
1
0.02%
CPI1
1
0.02%
DWF1
1
0.02%
HMGS
1
0.02%
CMK/IspE
1
0.02%
IDI
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 577 | 18 | UGT (221) | View species results |
| Alkaloid pathway | 425 | 26 | 7DLGT (113) | View species results |
| Phenylpropanoid pathway | 315 | 12 | POD (100) | View species results |
| Flavonoid pathway | 212 | 15 | UFGT (141) | View species results |
| Rosmarinic acid pathway | 158 | 7 | C4H (57) | View species results |
| Steroid pathway | 75 | 13 | CAS (34) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1551 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 337 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Pav_sc0001448.1_g130.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Pav_sc0001448.1_g140.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00050__sp_O22822_U74F2_ARATH |
| Pav_sc0001465.1_g140.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00014__sp_A0A172J2G3_UGT43_PUEML |
| Pav_sc0001518.1_g610.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Pav_sc0001543.1_g170.1.mk:mrna | Terpenoid | UGT | low | borderline | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| Pav_sc0001543.1_g310.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Pav_sc0001543.1_g360.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Pav_sc0001663.1_g130.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00098__sp_Q9LTH2_U76E2_ARATH |
| Pav_sc0001663.1_g170.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00039__sp_K4D3V7_U76E1_SOLLC |
| Pav_sc0001663.1_g180.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| Pav_sc0001663.1_g200.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| Pav_sc0001708.1_g010.1.mk:mrna | Terpenoid | UGT | low | borderline | UGT__00019__sp_A0A2R4LMF9_73C25_BARVU |
| Pav_sc0001723.1_g180.1.mk:CDS:1 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Pav_sc0001781.1_g010.1.br:CDS:1 | Terpenoid | UGT | medium | pass | UGT__00050__sp_O22822_U74F2_ARATH |
| Pav_sc0001781.1_g020.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Pav_sc0001794.1_g080.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00062__sp_P0DO66_GT721_SIRGR |
| Pav_sc0001794.1_g130.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00066__sp_P0DO73_GT724_SIRGR |
| Pav_sc0001794.1_g190.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| Pav_sc0001807.1_g060.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00048__sp_O22182_U84B1_ARATH |
| Pav_sc0001827.1_g310.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00055__sp_O48676_U74B1_ARATH |
| Pav_sc0001900.1_g240.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Pav_sc0001989.1_g090.1.br:CDS:1 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Pav_sc0002001.1_g150.1.br:CDS:1 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Pav_sc0002024.1_g110.1.mk:mrna | Terpenoid | UGT | low | borderline | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Pav_sc0002055.1_g200.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Pav_sc0002061.1_g010.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Pav_sc0002061.1_g020.1.br:CDS:1 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Pav_sc0002193.1_g020.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Pav_sc0002195.1_g210.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00009__sp_A0A0G4DBR5_FG3N_SOYBN |
| Pav_sc0002302.1_g020.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| Pav_sc0002302.1_g040.1.br:CDS:1 | Terpenoid | UGT | medium | pass | UGT__00021__sp_A7MAS5_75L17_MALDO |
| Pav_sc0002308.1_g020.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| Pav_sc0002360.1_g590.1.br:CDS:1 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Pav_sc0002375.1_g130.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Pav_sc0002567.1_g280.1.mk:CDS:1 | Terpenoid | UGT | medium | pass | UGT__00046__sp_K4GMD6_73C9_BARVU |
| Pav_sc0002584.1_g150.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Pav_sc0002623.1_g310.1.mk:mrna | Terpenoid | UGT | low | borderline | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| Pav_sc0002659.1_g140.1.br:CDS:1 | Terpenoid | UGT | medium | pass | UGT__00091__sp_Q9LNE6_U89C1_ARATH |
| Pav_sc0002685.1_g050.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Pav_sc0002685.1_g060.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Pav_sc0002685.1_g070.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Pav_sc0002685.1_g080.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Pav_sc0002685.1_g100.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Pav_sc0002854.1_g080.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Pav_sc0002854.1_g160.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Pav_sc0002854.1_g170.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Pav_sc0002854.1_g240.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Pav_sc0002854.1_g260.1.br:mrna | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Pav_sc0003086.1_g060.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Pav_sc0003086.1_g100.1.mk:mrna | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |