PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Pav_sc0000852.1_g1140.1.mk:mrna Flavonoid ANR low borderline
Pav_sc0000981.1_g040.1.mk:mrna Flavonoid ANR medium borderline
Pav_sc0000981.1_g150.1.mk:mrna Flavonoid ANR medium borderline
Pav_sc0001545.1_g080.1.mk:mrna Flavonoid ANR medium borderline
Pav_sc0002998.1_g020.1.mk:mrna Flavonoid ANR medium borderline
Pav_sc0002998.1_g030.1.mk:mrna Flavonoid ANR medium borderline
Pav_sc0002998.1_g040.1.mk:mrna Flavonoid ANR medium borderline
Pav_sc0002998.1_g060.1.br:mrna Flavonoid ANR medium borderline
Pav_sc0003515.1_g040.1.br:mrna Flavonoid ANR medium borderline
Pav_sc0005704.1_g030.1.mk:mrna Flavonoid ANR medium borderline
Pav_sc0005704.1_g040.1.mk:mrna Flavonoid ANR medium borderline
Pav_sc0005775.1_g030.1.br:mrna Flavonoid ANR medium borderline
Pav_co3998869.1_g010.1.mk:mrna Flavonoid ANS/LDOX medium pass
Pav_sc0000095.1_g1110.1.mk:mrna Flavonoid ANS/LDOX low borderline
Pav_sc0000095.1_g1690.1.mk:mrna Flavonoid ANS/LDOX low borderline
Pav_sc0000379.1_g060.1.mk:mrna Flavonoid ANS/LDOX medium borderline
Pav_sc0000410.1_g210.1.mk:mrna Flavonoid ANS/LDOX low borderline
Pav_sc0000431.1_g110.1.br:mrna Flavonoid ANS/LDOX medium borderline
Pav_sc0000491.1_g490.1.mk:mrna Flavonoid ANS/LDOX low borderline
Pav_sc0000583.1_g270.1.mk:mrna Flavonoid ANS/LDOX medium borderline
Pav_sc0000909.1_g740.1.mk:CDS:1 Flavonoid ANS/LDOX medium borderline
Pav_sc0001258.1_g160.1.mk:mrna Flavonoid ANS/LDOX medium borderline
Pav_sc0001909.1_g120.1.br:mrna Flavonoid ANS/LDOX medium borderline
Pav_sc0003138.1_g240.1.mk:mrna Flavonoid ANS/LDOX low borderline
Pav_sc0000206.1_g540.1.mk:mrna Flavonoid C4H medium borderline
Pav_sc0000370.1_g590.1.mk:mrna Flavonoid C4H low borderline
Pav_sc0000370.1_g740.1.mk:CDS:1 Flavonoid C4H low borderline
Pav_sc0000588.1_g100.1.mk:mrna Flavonoid C4H medium borderline
Pav_sc0000588.1_g160.1.mk:mrna Flavonoid C4H medium borderline
Pav_sc0001191.1_g080.1.mk:mrna Flavonoid C4H medium borderline
Pav_sc0001191.1_g090.1.mk:mrna Flavonoid C4H medium borderline
Pav_sc0001243.1_g150.1.br:mrna Flavonoid C4H medium borderline
Pav_sc0001248.1_g320.1.mk:mrna Flavonoid C4H medium pass
Pav_sc0001582.1_g440.1.br:mrna Flavonoid C4H low borderline
Pav_sc0001851.1_g160.1.br:mrna Flavonoid C4H medium borderline
Pav_sc0001851.1_g250.1.mk:CDS:1 Flavonoid C4H low borderline
Pav_sc0001851.1_g260.1.br:CDS:1 Flavonoid C4H medium borderline
Pav_sc0002021.1_g010.1.br:mrna Flavonoid C4H low borderline
Pav_sc0002230.1_g150.1.br:CDS:1 Flavonoid C4H low borderline
Pav_sc0005746.1_g010.1.mk:mrna Flavonoid C4H low borderline
Pav_sc0000040.1_g490.1.mk:mrna Flavonoid CHI medium pass
Pav_sc0000554.1_g2230.1.mk:mrna Flavonoid CHI low borderline
Pav_sc0005746.1_g030.1.mk:mrna Flavonoid CHI medium pass
Pav_sc0007510.1_g020.1.mk:mrna Flavonoid CHI medium pass
Pav_sc0000045.1_g280.1.mk:mrna Flavonoid CHS medium pass
Pav_sc0000045.1_g350.1.mk:mrna Flavonoid CHS medium pass
Pav_sc0000465.1_g1500.1.mk:mrna Flavonoid CHS medium pass
Pav_sc0000568.1_g020.1.mk:mrna Flavonoid CHS medium pass
Pav_sc0002441.1_g060.1.mk:mrna Flavonoid CHS medium pass
Pav_sc0009537.1_g010.1.mk:mrna Flavonoid CHS medium pass