PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Pav_sc0000351.1_g090.1.br:CDS:1 Rosmarinic Acid C4H medium pass
Pav_sc0000351.1_g190.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000358.1_g010.1.mk:CDS:1 Rosmarinic Acid C4H low borderline
Pav_sc0000358.1_g560.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000363.1_g020.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000363.1_g660.1.mk:CDS:1 Rosmarinic Acid C4H low borderline
Pav_sc0000370.1_g540.1.mk:mrna Rosmarinic Acid C4H medium pass
Pav_sc0000370.1_g550.1.mk:mrna Rosmarinic Acid C4H medium pass
Pav_sc0000370.1_g560.1.mk:mrna Rosmarinic Acid C4H medium pass
Pav_sc0000370.1_g580.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000370.1_g590.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000370.1_g650.1.br:CDS:1 Rosmarinic Acid C4H low borderline
Pav_sc0000370.1_g660.1.br:mrna Rosmarinic Acid C4H medium pass
Pav_sc0000370.1_g740.1.mk:CDS:1 Rosmarinic Acid C4H low borderline
Pav_sc0000375.1_g490.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000377.1_g220.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000383.1_g550.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000383.1_g560.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000395.1_g330.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000412.1_g670.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000412.1_g680.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000488.1_g280.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000503.1_g630.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000503.1_g710.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000503.1_g810.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000503.1_g830.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000514.1_g230.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000558.1_g530.1.mk:mrna Rosmarinic Acid C4H medium pass
Pav_sc0000558.1_g570.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000558.1_g600.1.mk:mrna Rosmarinic Acid C4H medium pass
Pav_sc0000558.1_g610.1.br:CDS:1 Rosmarinic Acid C4H low borderline
Pav_sc0000558.1_g620.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000558.1_g630.1.br:CDS:1 Rosmarinic Acid C4H low borderline
Pav_sc0000558.1_g670.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000558.1_g690.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000562.1_g080.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000562.1_g100.1.mk:mrna Rosmarinic Acid C4H medium pass
Pav_sc0000586.1_g150.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000586.1_g760.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000588.1_g100.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000588.1_g160.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000616.1_g240.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000652.1_g570.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000652.1_g610.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000667.1_g740.1.br:CDS:1 Rosmarinic Acid C4H medium pass
Pav_sc0000667.1_g750.1.br:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000704.1_g300.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000732.1_g050.1.mk:CDS:1 Rosmarinic Acid C4H low borderline
Pav_sc0000744.1_g100.1.mk:mrna Rosmarinic Acid C4H low borderline
Pav_sc0000747.1_g370.1.mk:CDS:1 Rosmarinic Acid C4H low borderline