PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pav_sc0001708.1_g020.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0001723.1_g180.1.mk:CDS:1 Alkaloid 7DLGT medium pass
Pav_sc0001781.1_g020.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0001794.1_g130.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0001794.1_g190.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0001827.1_g310.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0001900.1_g240.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0002001.1_g150.1.br:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0002055.1_g200.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0002061.1_g010.1.br:mrna Alkaloid 7DLGT low borderline
Pav_sc0002061.1_g020.1.br:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0002193.1_g020.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0002195.1_g210.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0002302.1_g040.1.br:CDS:1 Alkaloid 7DLGT high pass
Pav_sc0002308.1_g020.1.br:mrna Alkaloid 7DLGT low borderline
Pav_sc0002360.1_g590.1.br:CDS:1 Alkaloid 7DLGT medium pass
Pav_sc0002375.1_g130.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0002567.1_g270.1.mk:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0002584.1_g150.1.mk:mrna Alkaloid 7DLGT high pass
Pav_sc0002623.1_g310.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0002659.1_g140.1.br:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0002685.1_g060.1.mk:mrna Alkaloid 7DLGT high pass
Pav_sc0002685.1_g070.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0002685.1_g080.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0002685.1_g100.1.br:mrna Alkaloid 7DLGT high pass
Pav_sc0002854.1_g080.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0002854.1_g160.1.mk:mrna Alkaloid 7DLGT high pass
Pav_sc0002854.1_g170.1.br:mrna Alkaloid 7DLGT low borderline
Pav_sc0002854.1_g240.1.br:mrna Alkaloid 7DLGT high pass
Pav_sc0002854.1_g260.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0003086.1_g060.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0003086.1_g100.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0003086.1_g130.1.br:mrna Alkaloid 7DLGT low borderline
Pav_sc0003086.1_g190.1.br:CDS:1 Alkaloid 7DLGT medium pass
Pav_sc0003098.1_g140.1.mk:CDS:1 Alkaloid 7DLGT medium pass
Pav_sc0003468.1_g030.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0003492.1_g250.1.mk:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0003492.1_g260.1.mk:mrna Alkaloid 7DLGT low borderline
Pav_sc0004447.1_g060.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0004535.1_g100.1.br:mrna Alkaloid 7DLGT high pass
Pav_sc0004535.1_g120.1.br:CDS:1 Alkaloid 7DLGT medium pass
Pav_sc0004761.1_g020.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0004852.1_g030.1.br:mrna Alkaloid 7DLGT low borderline
Pav_sc0004852.1_g060.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0004879.1_g020.1.br:CDS:1 Alkaloid 7DLGT medium pass
Pav_sc0005366.1_g010.1.br:mrna Alkaloid 7DLGT medium pass
Pav_sc0005366.1_g020.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0005598.1_g050.1.mk:mrna Alkaloid 7DLGT medium pass
Pav_sc0006558.1_g060.1.mk:CDS:1 Alkaloid 7DLGT low borderline
Pav_sc0007097.1_g010.1.br:mrna Alkaloid 7DLGT high pass