PlantSME Plant secondary metabolism enzyme database

Prunus avium (prunus_avium)

Imported from atlas release summary for Prunus avium.

1762
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 577 18 UGT (221) View species results
Alkaloid pathway 425 26 7DLGT (113) View species results
Phenylpropanoid pathway 315 12 POD (100) View species results
Flavonoid pathway 212 15 UFGT (141) View species results
Rosmarinic acid pathway 158 7 C4H (57) View species results
Steroid pathway 75 13 CAS (34) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1551 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 337 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Pav_sc0001770.1_g060.1.br:CDS:1 Steroid CYP51G1 medium borderline
Pav_sc0002974.1_g150.1.br:mrna Steroid CYP51G1 medium borderline
Pav_sc0005522.1_g030.1.br:CDS:1 Steroid CYP51G1 medium borderline
Pav_sc0009583.1_g010.1.mk:mrna Steroid CYP51G1 medium borderline
Pav_co4045947.1_g010.1.mk:CDS:1 Steroid CYP90D1 medium borderline
Pav_sc0000099.1_g960.1.mk:mrna Steroid CYP90D1 medium borderline
Pav_sc0000143.1_g650.1.mk:mrna Steroid CYP90D1 medium borderline
Pav_sc0000195.1_g280.1.br:mrna Steroid CYP90D1 low borderline
Pav_sc0000206.1_g640.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0000229.1_g420.1.br:mrna Steroid CYP90D1 low borderline
Pav_sc0000229.1_g490.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0000229.1_g560.1.br:mrna Steroid CYP90D1 low borderline
Pav_sc0000258.1_g030.1.br:CDS:1 Steroid CYP90D1 low borderline
Pav_sc0000322.1_g150.1.mk:mrna Steroid CYP90D1 medium borderline
Pav_sc0000370.1_g650.1.br:CDS:1 Steroid CYP90D1 low borderline
Pav_sc0000412.1_g670.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0000558.1_g530.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0000558.1_g600.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0000588.1_g100.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0000616.1_g240.1.mk:mrna Steroid CYP90D1 medium borderline
Pav_sc0000667.1_g740.1.br:CDS:1 Steroid CYP90D1 low borderline
Pav_sc0000852.1_g220.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0000898.1_g050.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0001059.1_g510.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0001080.1_g970.1.br:CDS:1 Steroid CYP90D1 low borderline
Pav_sc0001191.1_g100.1.br:mrna Steroid CYP90D1 low borderline
Pav_sc0001196.1_g1130.1.mk:mrna Steroid CYP90D1 medium pass
Pav_sc0001406.1_g230.1.mk:mrna Steroid CYP90D1 medium borderline
Pav_sc0001412.1_g160.1.br:CDS:1 Steroid CYP90D1 low borderline
Pav_sc0002598.1_g020.1.br:CDS:1 Steroid CYP90D1 low borderline
Pav_sc0002608.1_g010.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0002608.1_g090.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0002974.1_g180.1.br:mrna Steroid CYP90D1 low borderline
Pav_sc0003054.1_g270.1.br:mrna Steroid CYP90D1 low borderline
Pav_sc0003283.1_g040.1.mk:mrna Steroid CYP90D1 medium borderline
Pav_sc0003418.1_g010.1.br:mrna Steroid CYP90D1 low borderline
Pav_sc0003738.1_g020.1.mk:mrna Steroid CYP90D1 medium borderline
Pav_sc0003868.1_g060.1.br:mrna Steroid CYP90D1 low borderline
Pav_sc0003868.1_g100.1.mk:mrna Steroid CYP90D1 low borderline
Pav_sc0009689.1_g020.1.br:CDS:1 Steroid CYP90D1 low borderline
Pav_sc0000554.1_g1020.1.mk:mrna Steroid DET2 low borderline
Pav_sc0000580.1_g050.1.mk:CDS:1 Steroid DET2 medium pass
Pav_sc0001802.1_g060.1.mk:mrna Steroid DET2 low borderline
Pav_sc0009701.1_g010.1.mk:mrna Steroid DET2 low borderline
Pav_sc0000410.1_g320.1.mk:mrna Steroid DWF1 medium pass
Pav_co4029819.1_g010.1.br:mrna Steroid DWF4/CYP90B1 low borderline
Pav_co4066763.1_g010.1.mk:mrna Steroid DWF4/CYP90B1 medium borderline
Pav_sc0000040.1_g810.1.mk:mrna Steroid DWF4/CYP90B1 medium borderline
Pav_sc0000045.1_g430.1.mk:mrna Steroid DWF4/CYP90B1 medium borderline
Pav_sc0000049.1_g010.1.mk:mrna Steroid DWF4/CYP90B1 low borderline