PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
Reset
Gene Pathway Family Confidence Status Best Target
Pspiscaffold_90271290 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_90273710 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_100024710 Rosmarinic Acid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Pspiscaffold_10014710 Rosmarinic Acid PAL low borderline PAL__00008__sp_Q8VXG7_PALY_MAIZE
Pspiscaffold_20040770 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_30056450 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_30056740 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_30056750 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_30060040 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_30062300 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_30062720 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_30062730 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_50103220 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_60124810 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_60138050 Rosmarinic Acid PAL low borderline PAL__00006__sp_Q68G84_PAM_TAXCH
Pspiscaffold_70151210 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_70151410 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_70151420 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_70151430 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_70184120 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_80216010 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_80216050 Rosmarinic Acid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_80247870 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_80247960 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_80248310 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Pspiscaffold_80248350 Rosmarinic Acid PAL medium pass PAL__00008__sp_Q8VXG7_PALY_MAIZE
Pspiscaffold_90271290 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Pspiscaffold_90273710 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR