PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
Pspiscaffold_10005380 Flavonoid 4CL medium pass
Pspiscaffold_20048240 Flavonoid 4CL low borderline
Pspiscaffold_40088030 Flavonoid 4CL low borderline
Pspiscaffold_410089500 Flavonoid 4CL medium pass
Pspiscaffold_50103370 Flavonoid 4CL low borderline
Pspiscaffold_50116290 Flavonoid 4CL medium pass
Pspiscaffold_60127770 Flavonoid 4CL low borderline
Pspiscaffold_60136800 Flavonoid 4CL medium pass
Pspiscaffold_60145630 Flavonoid 4CL low borderline
Pspiscaffold_70168500 Flavonoid 4CL medium pass
Pspiscaffold_70180040 Flavonoid 4CL low borderline
Pspiscaffold_70181000 Flavonoid 4CL medium pass
Pspiscaffold_70188990 Flavonoid 4CL low borderline
Pspiscaffold_80223170 Flavonoid 4CL low borderline
Pspiscaffold_80232480 Flavonoid 4CL low borderline
Pspiscaffold_80234880 Flavonoid 4CL medium pass
Pspiscaffold_80236630 Flavonoid 4CL medium pass
Pspiscaffold_80236680 Flavonoid 4CL medium pass
Pspiscaffold_80239930 Flavonoid 4CL low borderline
Pspiscaffold_80249910 Flavonoid 4CL medium pass
Pspiscaffold_80253240 Flavonoid 4CL medium pass
Pspiscaffold_90259980 Flavonoid 4CL low borderline
Pspiscaffold_90261590 Flavonoid 4CL low borderline
Pspiscaffold_90277180 Flavonoid 4CL low borderline
Pspiscaffold_90293720 Flavonoid 4CL medium pass
Pspiscaffold_90294530 Flavonoid 4CL medium pass
Pspiscaffold_90298600 Flavonoid 4CL medium pass
Pspiscaffold_60119730 Flavonoid ANR medium borderline
Pspiscaffold_60121800 Flavonoid ANR medium pass
Pspiscaffold_70156470 Flavonoid ANR medium borderline
Pspiscaffold_80241730 Flavonoid ANR medium borderline
Pspiscaffold_90283110 Flavonoid ANR medium borderline
Pspiscaffold_30073290 Flavonoid ANS/LDOX medium borderline
Pspiscaffold_60121430 Flavonoid ANS/LDOX medium borderline
Pspiscaffold_50097100 Flavonoid C4H low borderline
Pspiscaffold_50108650 Flavonoid C4H medium borderline
Pspiscaffold_50108700 Flavonoid C4H medium borderline
Pspiscaffold_50108730 Flavonoid C4H medium borderline
Pspiscaffold_50109070 Flavonoid C4H medium borderline
Pspiscaffold_60120560 Flavonoid C4H medium borderline
Pspiscaffold_70185460 Flavonoid C4H low borderline
Pspiscaffold_80206600 Flavonoid C4H medium borderline
Pspiscaffold_90287580 Flavonoid C4H low borderline
Pspiscaffold_50113350 Flavonoid CHI medium pass
Pspiscaffold_70178610 Flavonoid CHI low borderline
Pspiscaffold_80222630 Flavonoid CHI medium pass
Pspiscaffold_90291110 Flavonoid CHI medium pass
Pspiscaffold_10013210 Flavonoid CHS medium pass
Pspiscaffold_20038350 Flavonoid CHS medium pass
Pspiscaffold_20040780 Flavonoid CHS medium pass