PlantSME Plant secondary metabolism enzyme database

Pyrrhobryum spiniforme (pyrrhobryum_spiniforme)

Imported from atlas release summary for Pyrrhobryum spiniforme.

757
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 175 10 POD (83) View species results
Alkaloid pathway 166 16 PYKS (51) View species results
Terpenoid pathway 150 19 BAHD (65) View species results
Flavonoid pathway 141 9 CHS (61) View species results
Rosmarinic acid pathway 82 7 C4H (31) View species results
Steroid pathway 43 12 CAS (14) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 631 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 124 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Pspiscaffold_70184650 Phenylpropanoid CAD low borderline
Pspiscaffold_80241730 Phenylpropanoid CAD medium borderline
Pspiscaffold_80248420 Phenylpropanoid CAD low borderline
Pspiscaffold_90259390 Phenylpropanoid CAD low borderline
Pspiscaffold_90259400 Phenylpropanoid CAD medium pass
Pspiscaffold_90272580 Phenylpropanoid CAD low borderline
Pspiscaffold_90290960 Phenylpropanoid CAD low borderline
Pspiscaffold_140035560 Phenylpropanoid CCR low borderline
Pspiscaffold_20052530 Phenylpropanoid CCR low borderline
Pspiscaffold_70156470 Phenylpropanoid CCR medium borderline
Pspiscaffold_70191710 Phenylpropanoid CCR low borderline
Pspiscaffold_90268760 Phenylpropanoid CCR medium borderline
Pspiscaffold_90283110 Phenylpropanoid CCR medium borderline
Pspiscaffold_90291880 Phenylpropanoid CCR low borderline
Pspiscaffold_40082700 Phenylpropanoid CCoAOMT medium pass
Pspiscaffold_50099070 Phenylpropanoid CCoAOMT medium pass
Pspiscaffold_50094880 Phenylpropanoid COMT low borderline
Pspiscaffold_50113810 Phenylpropanoid COMT medium pass
Pspiscaffold_60127080 Phenylpropanoid COMT low borderline
Pspiscaffold_60127100 Phenylpropanoid COMT medium pass
Pspiscaffold_60145000 Phenylpropanoid COMT low borderline
Pspiscaffold_70156550 Phenylpropanoid COMT low borderline
Pspiscaffold_70163300 Phenylpropanoid COMT medium pass
Pspiscaffold_70163320 Phenylpropanoid COMT low borderline
Pspiscaffold_70163340 Phenylpropanoid COMT medium pass
Pspiscaffold_70179280 Phenylpropanoid COMT medium pass
Pspiscaffold_70179420 Phenylpropanoid COMT medium pass
Pspiscaffold_70198740 Phenylpropanoid COMT medium pass
Pspiscaffold_70198760 Phenylpropanoid COMT medium pass
Pspiscaffold_90259290 Phenylpropanoid COMT medium pass
Pspiscaffold_20041930 Phenylpropanoid CSE low borderline
Pspiscaffold_30061720 Phenylpropanoid CSE medium pass
Pspiscaffold_30067390 Phenylpropanoid CSE medium pass
Pspiscaffold_50110060 Phenylpropanoid CSE medium pass
Pspiscaffold_60145030 Phenylpropanoid CSE medium pass
Pspiscaffold_80234720 Phenylpropanoid CSE medium pass
Pspiscaffold_80244590 Phenylpropanoid CSE medium pass
Pspiscaffold_80244600 Phenylpropanoid CSE low borderline
Pspiscaffold_90263880 Phenylpropanoid CSE medium pass
Pspiscaffold_40082330 Phenylpropanoid F5H/CYP84A medium borderline
Pspiscaffold_40083990 Phenylpropanoid F5H/CYP84A medium borderline
Pspiscaffold_70162510 Phenylpropanoid F5H/CYP84A medium borderline
Pspiscaffold_90294500 Phenylpropanoid F5H/CYP84A medium borderline
Pspiscaffold_100025330 Phenylpropanoid HCT low borderline
Pspiscaffold_10013240 Phenylpropanoid HCT low borderline
Pspiscaffold_20049320 Phenylpropanoid HCT medium pass
Pspiscaffold_20049330 Phenylpropanoid HCT low borderline
Pspiscaffold_30060300 Phenylpropanoid HCT medium pass
Pspiscaffold_30071830 Phenylpropanoid HCT low borderline
Pspiscaffold_60133470 Phenylpropanoid HCT medium pass