PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Protein/Isoform Record Pathway Family Confidence Status
Roff15400203210 Rosmarinic Acid 4CL low borderline
Roff15400203220 Rosmarinic Acid 4CL low borderline
Roff15400203230 Rosmarinic Acid 4CL low borderline
Roff15400203240 Rosmarinic Acid 4CL low borderline
Roff19230249880 Rosmarinic Acid 4CL medium pass
Roff19230249890 Rosmarinic Acid 4CL medium pass
Roff21180275590 Rosmarinic Acid 4CL medium pass
Roff21810292540 Rosmarinic Acid 4CL low borderline
Roff22220297230 Rosmarinic Acid 4CL low borderline
Roff22240298450 Rosmarinic Acid 4CL low borderline
Roff22530301590 Rosmarinic Acid 4CL medium pass
Roff22530301600 Rosmarinic Acid 4CL medium pass
Roff24020307560 Rosmarinic Acid 4CL medium pass
Roff24020307570 Rosmarinic Acid 4CL medium pass
Roff24160314270 Rosmarinic Acid 4CL low borderline
Roff24450323900 Rosmarinic Acid 4CL medium pass
Roff24450323910 Rosmarinic Acid 4CL medium pass
Roff24450323920 Rosmarinic Acid 4CL medium pass
Roff24960328030 Rosmarinic Acid 4CL medium pass
Roff25090332860 Rosmarinic Acid 4CL medium pass
Roff25220336570 Rosmarinic Acid 4CL medium pass
Roff26820355210 Rosmarinic Acid 4CL medium pass
Roff27430359820 Rosmarinic Acid 4CL low borderline
Roff2799070366430 Rosmarinic Acid 4CL low borderline
Roff2898070370900 Rosmarinic Acid 4CL medium pass
Roff29180372820 Rosmarinic Acid 4CL low borderline
Roff29180372830 Rosmarinic Acid 4CL low borderline
Roff3265700383220 Rosmarinic Acid 4CL low borderline
Roff3482370396290 Rosmarinic Acid 4CL medium pass
Roff3497610398030 Rosmarinic Acid 4CL medium pass
Roff3534240400920 Rosmarinic Acid 4CL medium pass
Roff3745230422210 Rosmarinic Acid 4CL low borderline
Roff3834700439020 Rosmarinic Acid 4CL low borderline
Roff3834700439030 Rosmarinic Acid 4CL low borderline
Roff3930660476780 Rosmarinic Acid 4CL medium pass
Roff3935230478160 Rosmarinic Acid 4CL medium pass
Roff4219520483060 Rosmarinic Acid 4CL medium pass
Roff4219530483090 Rosmarinic Acid 4CL medium pass
Roff4245130483140 Rosmarinic Acid 4CL medium pass
Roff4245140483170 Rosmarinic Acid 4CL medium pass
Roff8110497100 Rosmarinic Acid 4CL medium pass
Roff8110497230 Rosmarinic Acid 4CL medium pass
Roff8300509080 Rosmarinic Acid 4CL low borderline