PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLGT
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Gene Pathway Family Confidence Status
Roff16590216230 Alkaloid 7DLGT medium pass
Roff16590216240 Alkaloid 7DLGT medium pass
Roff16590216250 Alkaloid 7DLGT medium pass
Roff16730218360 Alkaloid 7DLGT low borderline
Roff17120219910 Alkaloid 7DLGT low borderline
Roff17120219920 Alkaloid 7DLGT medium pass
Roff17120219940 Alkaloid 7DLGT medium pass
Roff17220221760 Alkaloid 7DLGT low borderline
Roff17590225220 Alkaloid 7DLGT low borderline
Roff17700226350 Alkaloid 7DLGT low borderline
Roff17700226360 Alkaloid 7DLGT medium pass
Roff17700226830 Alkaloid 7DLGT high pass
Roff17910228280 Alkaloid 7DLGT low borderline
Roff18080230960 Alkaloid 7DLGT medium pass
Roff18080230990 Alkaloid 7DLGT high pass
Roff18080231000 Alkaloid 7DLGT high pass
Roff18080231020 Alkaloid 7DLGT high pass
Roff18080231030 Alkaloid 7DLGT low borderline
Roff18080231040 Alkaloid 7DLGT low borderline
Roff18110231890 Alkaloid 7DLGT medium pass
Roff18550240290 Alkaloid 7DLGT low borderline
Roff18940245370 Alkaloid 7DLGT low borderline
Roff18940245380 Alkaloid 7DLGT low borderline
Roff19480251940 Alkaloid 7DLGT medium pass
Roff19480251960 Alkaloid 7DLGT low borderline
Roff20400261110 Alkaloid 7DLGT low borderline
Roff20400261560 Alkaloid 7DLGT medium pass
Roff21180274540 Alkaloid 7DLGT low borderline
Roff21180274550 Alkaloid 7DLGT low borderline
Roff21180274560 Alkaloid 7DLGT low borderline
Roff21540286810 Alkaloid 7DLGT low borderline
Roff21540286820 Alkaloid 7DLGT low borderline
Roff21540286830 Alkaloid 7DLGT low borderline
Roff21810293300 Alkaloid 7DLGT low borderline
Roff21810293310 Alkaloid 7DLGT low borderline
Roff2223600298030 Alkaloid 7DLGT medium pass
Roff2223600298040 Alkaloid 7DLGT medium pass
Roff22310299090 Alkaloid 7DLGT medium pass
Roff22310299100 Alkaloid 7DLGT low borderline
Roff22310299110 Alkaloid 7DLGT medium pass
Roff22310299120 Alkaloid 7DLGT medium pass
Roff22310299130 Alkaloid 7DLGT medium pass
Roff22430300820 Alkaloid 7DLGT low borderline
Roff22610303790 Alkaloid 7DLGT low borderline
Roff24020307910 Alkaloid 7DLGT low borderline
Roff24030308810 Alkaloid 7DLGT low borderline
Roff24030308820 Alkaloid 7DLGT low borderline
Roff24030308830 Alkaloid 7DLGT low borderline
Roff24080310300 Alkaloid 7DLGT low borderline
Roff24100311670 Alkaloid 7DLGT low borderline