PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Gene Pathway Family Confidence Status
Roff13310164120 Phenylpropanoid C3'H/CYP98A low borderline
Roff13310164140 Phenylpropanoid C3'H/CYP98A low borderline
Roff13310164590 Phenylpropanoid C3'H/CYP98A medium borderline
Roff13510168790 Phenylpropanoid C3'H/CYP98A low borderline
Roff13630170600 Phenylpropanoid C3'H/CYP98A low borderline
Roff13940173730 Phenylpropanoid C3'H/CYP98A medium pass
Roff14290178330 Phenylpropanoid C3'H/CYP98A low borderline
Roff14370182230 Phenylpropanoid C3'H/CYP98A low borderline
Roff14370182680 Phenylpropanoid C3'H/CYP98A medium borderline
Roff14370183220 Phenylpropanoid C3'H/CYP98A medium borderline
Roff14370183240 Phenylpropanoid C3'H/CYP98A medium borderline
Roff14370184520 Phenylpropanoid C3'H/CYP98A low borderline
Roff14430186670 Phenylpropanoid C3'H/CYP98A low borderline
Roff14430187160 Phenylpropanoid C3'H/CYP98A medium pass
Roff14430187220 Phenylpropanoid C3'H/CYP98A medium borderline
Roff14430187230 Phenylpropanoid C3'H/CYP98A medium borderline
Roff14430187240 Phenylpropanoid C3'H/CYP98A medium borderline
Roff14510188640 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15280197570 Phenylpropanoid C3'H/CYP98A low borderline
Roff15360199190 Phenylpropanoid C3'H/CYP98A low borderline
Roff15360200160 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15360202760 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15360202770 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15360202780 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15410203610 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15490204730 Phenylpropanoid C3'H/CYP98A low borderline
Roff15910210270 Phenylpropanoid C3'H/CYP98A low borderline
Roff15910211260 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15910211450 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15910211460 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15910211470 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15910211480 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15910211490 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15910211500 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15910211510 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15910211530 Phenylpropanoid C3'H/CYP98A medium borderline
Roff15910211540 Phenylpropanoid C3'H/CYP98A medium borderline
Roff16480215440 Phenylpropanoid C3'H/CYP98A low borderline
Roff16680218220 Phenylpropanoid C3'H/CYP98A low borderline
Roff17200220000 Phenylpropanoid C3'H/CYP98A medium borderline
Roff17200220080 Phenylpropanoid C3'H/CYP98A medium borderline
Roff17220221220 Phenylpropanoid C3'H/CYP98A low borderline
Roff17220221230 Phenylpropanoid C3'H/CYP98A low borderline
Roff17700226820 Phenylpropanoid C3'H/CYP98A medium borderline
Roff18070229490 Phenylpropanoid C3'H/CYP98A low borderline
Roff18070229820 Phenylpropanoid C3'H/CYP98A medium borderline
Roff18120232220 Phenylpropanoid C3'H/CYP98A low borderline
Roff18160233110 Phenylpropanoid C3'H/CYP98A low borderline
Roff18260233670 Phenylpropanoid C3'H/CYP98A medium borderline
Roff19230249760 Phenylpropanoid C3'H/CYP98A low borderline