PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C3'H/CYP98A
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Protein/Isoform Record Pathway Family Confidence Status
Roff3870510450480 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3879270452990 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3879570453250 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3880740453450 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3881500453650 Phenylpropanoid C3'H/CYP98A low borderline
Roff3881500453660 Phenylpropanoid C3'H/CYP98A low borderline
Roff3891400457770 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3891950458560 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3893840459450 Phenylpropanoid C3'H/CYP98A low borderline
Roff3900160462940 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3900160462960 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3900160462970 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3900160462990 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3918300470890 Phenylpropanoid C3'H/CYP98A low borderline
Roff3921180472560 Phenylpropanoid C3'H/CYP98A low borderline
Roff3926400474700 Phenylpropanoid C3'H/CYP98A low borderline
Roff3929580476340 Phenylpropanoid C3'H/CYP98A low borderline
Roff3931510477100 Phenylpropanoid C3'H/CYP98A low borderline
Roff3934860477900 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3936650478590 Phenylpropanoid C3'H/CYP98A low borderline
Roff3938330479630 Phenylpropanoid C3'H/CYP98A medium borderline
Roff3941090480850 Phenylpropanoid C3'H/CYP98A low borderline
Roff4447860483860 Phenylpropanoid C3'H/CYP98A low borderline
Roff5661200487350 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5661210487380 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5851610492350 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5851620492390 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5851620492400 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5851630492410 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5851640492430 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5871460492890 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5871460492900 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5871470492910 Phenylpropanoid C3'H/CYP98A medium borderline
Roff5871470492920 Phenylpropanoid C3'H/CYP98A medium borderline
Roff8110495070 Phenylpropanoid C3'H/CYP98A medium borderline
Roff8110495310 Phenylpropanoid C3'H/CYP98A low borderline
Roff8110495380 Phenylpropanoid C3'H/CYP98A medium borderline
Roff8110495390 Phenylpropanoid C3'H/CYP98A medium borderline
Roff8110495540 Phenylpropanoid C3'H/CYP98A medium borderline
Roff8110495550 Phenylpropanoid C3'H/CYP98A medium borderline
Roff8110498260 Phenylpropanoid C3'H/CYP98A low borderline
Roff8110498870 Phenylpropanoid C3'H/CYP98A medium borderline
Roff8300509670 Phenylpropanoid C3'H/CYP98A low borderline
Roff8300513680 Phenylpropanoid C3'H/CYP98A medium borderline