PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CYP76
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Roff3880740453450 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Roff3891400457770 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Roff3891950458560 Terpenoid CYP76 medium borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Roff3900160462940 Terpenoid CYP76 medium borderline CYP76__00002__sp_A0A0C5QRZ2_C76H2_SALFT
Roff3900160462960 Terpenoid CYP76 medium borderline CYP76__00001__sp_A0A0C5Q4Y6_C76H2_ROSOF
Roff3900160462970 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Roff3929580476340 Terpenoid CYP76 low borderline CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Roff5661200487350 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Roff5661200487360 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Roff5661210487380 Terpenoid CYP76 medium borderline CYP76__00010__sp_A0A2K9RG08_CYBK1_VITAC
Roff5661210487390 Terpenoid CYP76 medium pass CYP76__00009__sp_A0A1Z3GBS4_CYPH3_ISORU
Roff5851610492350 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Roff5851620492390 Terpenoid CYP76 medium borderline CYP76__00013__sp_D1MI46_C76BA_SWEMU
Roff5851620492400 Terpenoid CYP76 medium borderline CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Roff5851630492410 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Roff5851640492430 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI
Roff8110495070 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Roff8110495300 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Roff8110495310 Terpenoid CYP76 low borderline CYP76__00011__sp_A0A3Q9R4N5_C76B7_ARNEU
Roff8110495380 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Roff8110495390 Terpenoid CYP76 medium borderline CYP76__00022__sp_Q8VWZ7_C76B6_CATRO
Roff8110495540 Terpenoid CYP76 medium pass CYP76__00025__sp_W8JIS5_IO_CATRO
Roff8110495550 Terpenoid CYP76 medium borderline CYP76__00023__sp_S4UX02_CYPH1_SALMI
Roff8110498870 Terpenoid CYP76 medium borderline CYP76__00014__sp_I3PFJ5_C76AD_BETVU
Roff8300513680 Terpenoid CYP76 medium pass CYP76__00012__sp_A0AA51VJB7_C7694_LOPWI