PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
Roff14370184530 Steroid DWF4/CYP90B1 low borderline
Roff14430186670 Steroid DWF4/CYP90B1 medium borderline
Roff14430187160 Steroid DWF4/CYP90B1 low borderline
Roff14430187220 Steroid DWF4/CYP90B1 low borderline
Roff14430187230 Steroid DWF4/CYP90B1 low borderline
Roff14430187240 Steroid DWF4/CYP90B1 low borderline
Roff15280197570 Steroid DWF4/CYP90B1 low borderline
Roff15360199190 Steroid DWF4/CYP90B1 medium borderline
Roff15360201240 Steroid DWF4/CYP90B1 medium borderline
Roff15360202760 Steroid DWF4/CYP90B1 low borderline
Roff15360202770 Steroid DWF4/CYP90B1 low borderline
Roff15360202780 Steroid DWF4/CYP90B1 low borderline
Roff15410203600 Steroid DWF4/CYP90B1 low borderline
Roff15410203610 Steroid DWF4/CYP90B1 low borderline
Roff15910211460 Steroid DWF4/CYP90B1 low borderline
Roff15910211480 Steroid DWF4/CYP90B1 low borderline
Roff15910211490 Steroid DWF4/CYP90B1 low borderline
Roff15910211530 Steroid DWF4/CYP90B1 low borderline
Roff15910211540 Steroid DWF4/CYP90B1 low borderline
Roff16480215440 Steroid DWF4/CYP90B1 medium borderline
Roff16680218220 Steroid DWF4/CYP90B1 low borderline
Roff17200220080 Steroid DWF4/CYP90B1 low borderline
Roff17220221220 Steroid DWF4/CYP90B1 low borderline
Roff17220221230 Steroid DWF4/CYP90B1 low borderline
Roff18070229480 Steroid DWF4/CYP90B1 low borderline
Roff18160233110 Steroid DWF4/CYP90B1 low borderline
Roff19530253710 Steroid DWF4/CYP90B1 low borderline
Roff19530254030 Steroid DWF4/CYP90B1 low borderline
Roff1985410255790 Steroid DWF4/CYP90B1 medium borderline
Roff20040257770 Steroid DWF4/CYP90B1 medium borderline
Roff20060258210 Steroid DWF4/CYP90B1 medium borderline
Roff2030050260000 Steroid DWF4/CYP90B1 low borderline
Roff20590265480 Steroid DWF4/CYP90B1 low borderline
Roff21350279990 Steroid DWF4/CYP90B1 low borderline
Roff21350280000 Steroid DWF4/CYP90B1 low borderline
Roff21350280010 Steroid DWF4/CYP90B1 low borderline
Roff21350280040 Steroid DWF4/CYP90B1 low borderline
Roff21350280820 Steroid DWF4/CYP90B1 medium borderline
Roff21630287790 Steroid DWF4/CYP90B1 medium borderline
Roff2220900296650 Steroid DWF4/CYP90B1 low borderline
Roff2223960298160 Steroid DWF4/CYP90B1 low borderline
Roff23870304680 Steroid DWF4/CYP90B1 low borderline
Roff23870304700 Steroid DWF4/CYP90B1 low borderline
Roff23900305700 Steroid DWF4/CYP90B1 low borderline
Roff24170314790 Steroid DWF4/CYP90B1 medium borderline
Roff24170314800 Steroid DWF4/CYP90B1 medium borderline
Roff24170315440 Steroid DWF4/CYP90B1 low borderline
Roff24470324250 Steroid DWF4/CYP90B1 medium borderline
Roff24470324280 Steroid DWF4/CYP90B1 medium borderline
Roff24470324290 Steroid DWF4/CYP90B1 medium borderline