PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
Roff15910211500 Flavonoid IFS medium borderline
Roff15910211510 Flavonoid IFS medium borderline
Roff15910211530 Flavonoid IFS medium borderline
Roff15910211540 Flavonoid IFS medium borderline
Roff16480215440 Flavonoid IFS low borderline
Roff16700218300 Flavonoid IFS low borderline
Roff16700218310 Flavonoid IFS low borderline
Roff17200220080 Flavonoid IFS medium borderline
Roff18070229490 Flavonoid IFS low borderline
Roff18070229820 Flavonoid IFS medium borderline
Roff18120232220 Flavonoid IFS low borderline
Roff18160233110 Flavonoid IFS low borderline
Roff19230249760 Flavonoid IFS low borderline
Roff19280250340 Flavonoid IFS low borderline
Roff19800255560 Flavonoid IFS low borderline
Roff1985410255790 Flavonoid IFS medium borderline
Roff20060258210 Flavonoid IFS low borderline
Roff20210259840 Flavonoid IFS low borderline
Roff20570263970 Flavonoid IFS low borderline
Roff20590264630 Flavonoid IFS low borderline
Roff20590265480 Flavonoid IFS medium borderline
Roff20850269630 Flavonoid IFS medium pass
Roff21180273090 Flavonoid IFS medium borderline
Roff21350279960 Flavonoid IFS medium borderline
Roff21350279970 Flavonoid IFS medium borderline
Roff21350279980 Flavonoid IFS low borderline
Roff21350280040 Flavonoid IFS medium borderline
Roff21350280820 Flavonoid IFS low borderline
Roff21630287790 Flavonoid IFS low borderline
Roff21810293520 Flavonoid IFS low borderline
Roff21810294720 Flavonoid IFS medium borderline
Roff21810294760 Flavonoid IFS low borderline
Roff2220900296650 Flavonoid IFS medium borderline
Roff22280298630 Flavonoid IFS low borderline
Roff22560303250 Flavonoid IFS medium borderline
Roff23870304680 Flavonoid IFS medium borderline
Roff23870304690 Flavonoid IFS medium borderline
Roff23870304700 Flavonoid IFS medium borderline
Roff23900305700 Flavonoid IFS low borderline
Roff24100311920 Flavonoid IFS medium borderline
Roff24100311930 Flavonoid IFS medium borderline
Roff24170314480 Flavonoid IFS low borderline
Roff24170315430 Flavonoid IFS medium borderline
Roff24170315440 Flavonoid IFS medium borderline
Roff24470324280 Flavonoid IFS low borderline
Roff24470324290 Flavonoid IFS low borderline
Roff24470324300 Flavonoid IFS low borderline
Roff24470324450 Flavonoid IFS low borderline
Roff24960330510 Flavonoid IFS low borderline
Roff25190335690 Flavonoid IFS low borderline