PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
Roff25210336530 Flavonoid IFS medium borderline
Roff25300342080 Flavonoid IFS low borderline
Roff25300342090 Flavonoid IFS medium borderline
Roff25970347110 Flavonoid IFS medium borderline
Roff26200349060 Flavonoid IFS medium borderline
Roff26200349070 Flavonoid IFS medium borderline
Roff26200349470 Flavonoid IFS medium borderline
Roff26200349570 Flavonoid IFS medium borderline
Roff26200349720 Flavonoid IFS low borderline
Roff26200349730 Flavonoid IFS low borderline
Roff26630353270 Flavonoid IFS medium borderline
Roff2708210357750 Flavonoid IFS low borderline
Roff27430359470 Flavonoid IFS medium borderline
Roff27430361290 Flavonoid IFS medium borderline
Roff27430361520 Flavonoid IFS low borderline
Roff27430362460 Flavonoid IFS low borderline
Roff28570368770 Flavonoid IFS medium borderline
Roff28570368970 Flavonoid IFS low borderline
Roff2894150370150 Flavonoid IFS low borderline
Roff2896650370450 Flavonoid IFS low borderline
Roff2896650370460 Flavonoid IFS medium borderline
Roff2924320373320 Flavonoid IFS medium borderline
Roff2926030373600 Flavonoid IFS medium borderline
Roff2953410375140 Flavonoid IFS medium borderline
Roff2976730375750 Flavonoid IFS medium borderline
Roff3081320377030 Flavonoid IFS low borderline
Roff3104540377700 Flavonoid IFS medium borderline
Roff3259240382750 Flavonoid IFS low borderline
Roff3297100384370 Flavonoid IFS medium borderline
Roff3303940385080 Flavonoid IFS low borderline
Roff3323720386280 Flavonoid IFS medium borderline
Roff3338840388330 Flavonoid IFS low borderline
Roff3393790390520 Flavonoid IFS low borderline
Roff3393790390530 Flavonoid IFS low borderline
Roff3417090391760 Flavonoid IFS medium borderline
Roff3421910392160 Flavonoid IFS medium borderline
Roff3453600393490 Flavonoid IFS low borderline
Roff3480840396120 Flavonoid IFS medium borderline
Roff3480840396130 Flavonoid IFS medium borderline
Roff3534660400950 Flavonoid IFS low borderline
Roff3541250401250 Flavonoid IFS medium borderline
Roff3577990404420 Flavonoid IFS medium borderline
Roff3612280407130 Flavonoid IFS low borderline
Roff3669610412160 Flavonoid IFS medium borderline
Roff3669610412170 Flavonoid IFS medium borderline
Roff3705800416300 Flavonoid IFS medium borderline
Roff3707840416590 Flavonoid IFS medium borderline
Roff3723010418290 Flavonoid IFS low borderline
Roff3728740418920 Flavonoid IFS low borderline
Roff3759400424480 Flavonoid IFS medium borderline