PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
Roff3507230399410 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff3529030400790 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff3557670402340 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Roff3639500409090 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff3639500409100 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff3669420412110 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff3834760439040 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff3876500451950 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff3908710467150 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff3913610469200 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff8110495710 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Roff8110495730 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff8110495740 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff8300512060 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff8300513690 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff8300513700 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff8300513710 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff8300513720 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff8300513730 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH