PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Roff12680147000 Alkaloid NMT medium pass NMT__00068__sp_Q9XI84_RBCMT_ARATH
Roff12730150170 Alkaloid NMT medium pass NMT__00055__sp_Q9FNC7_SUVR2_ARATH
Roff12790154080 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Roff12790154090 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Roff12820154900 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff12900157430 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
Roff12900157440 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
Roff13380167950 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
Roff13630170860 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff13630170870 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff13630170880 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff13630170890 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff13630170900 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff13880173120 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Roff13880173130 Alkaloid NMT low borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Roff13940173810 Alkaloid NMT medium pass NMT__00020__sp_O23372_ATXR3_ARATH
Roff13940173870 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
Roff14340181920 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Roff14530188940 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff14530188950 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff14530188960 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff14670191240 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Roff14700193300 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
Roff14700193310 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
Roff15360199840 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Roff15360199850 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Roff15360199860 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Roff15360199870 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Roff15360202310 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Roff16390214970 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
Roff16590216400 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
Roff16590216410 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
Roff16640217080 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Roff16680217880 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Roff17600225290 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Roff18120232240 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Roff18450237120 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Roff19070248230 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Roff19140248460 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Roff19200248970 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200248980 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200248990 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200249000 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200249010 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200249020 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200249030 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19530252030 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Roff19950257330 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Roff20400261060 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
Roff21140272430 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH