PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: NMT
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Gene Pathway Family Confidence Status Best Target
Roff3835440439120 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff3835440439130 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff3835440439140 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff3853250444170 Alkaloid NMT medium pass NMT__00069__sp_Q9ZSM8_EZA1_ARATH
Roff3857780445470 Alkaloid NMT low borderline NMT__00068__sp_Q9XI84_RBCMT_ARATH
Roff3892970459070 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Roff3892970459080 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Roff3892970459090 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Roff3894930460140 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Roff3920110471870 Alkaloid NMT low borderline NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Roff3923320473570 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Roff3926630474750 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Roff3926630474760 Alkaloid NMT low borderline NMT__00016__sp_F4JNX3_CMKMT_ARATH
Roff3935230478100 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Roff3935230478110 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff5752540488490 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Roff5752540488500 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Roff5752540488510 Alkaloid NMT medium borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Roff5752540488520 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Roff5752550488540 Alkaloid NMT medium borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Roff5752550488550 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Roff5760530488680 Alkaloid NMT medium pass NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
Roff5760540488790 Alkaloid NMT medium borderline NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
Roff5760540488800 Alkaloid NMT medium borderline NMT__00008__sp_A0AA51VIL5_NMT2_LOPWI
Roff5788480489750 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Roff5788480489760 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Roff5788490489790 Alkaloid NMT medium pass NMT__00047__sp_Q8VZJ1_ATXR5_ARATH
Roff8110494950 Alkaloid NMT medium borderline NMT__00010__sp_A4GE70_DXMT1_COFCA
Roff8110494960 Alkaloid NMT medium borderline NMT__00043__sp_Q8H0D2_DXMT1_COFAR
Roff8210507380 Alkaloid NMT low borderline NMT__00059__sp_Q9M571_PEAMT_SPIOL