PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Roff20040257770 Alkaloid T3O low borderline
Roff20590265480 Alkaloid T3O medium borderline
Roff20620267320 Alkaloid T3O low borderline
Roff21180273090 Alkaloid T3O medium borderline
Roff21350279970 Alkaloid T3O medium borderline
Roff21350279990 Alkaloid T3O medium borderline
Roff21350280000 Alkaloid T3O medium borderline
Roff21350280040 Alkaloid T3O medium borderline
Roff21540286720 Alkaloid T3O medium borderline
Roff21630287790 Alkaloid T3O low borderline
Roff21760291140 Alkaloid T3O medium borderline
Roff21810293520 Alkaloid T3O low borderline
Roff21810294720 Alkaloid T3O medium borderline
Roff2220900296650 Alkaloid T3O medium borderline
Roff2224290298550 Alkaloid T3O medium borderline
Roff22280298630 Alkaloid T3O low borderline
Roff22560303250 Alkaloid T3O medium borderline
Roff23870304680 Alkaloid T3O medium borderline
Roff23870304700 Alkaloid T3O medium borderline
Roff24030308570 Alkaloid T3O medium borderline
Roff24080309210 Alkaloid T3O low borderline
Roff24100311920 Alkaloid T3O medium borderline
Roff24100311930 Alkaloid T3O medium borderline
Roff24170314480 Alkaloid T3O low borderline
Roff24170314810 Alkaloid T3O medium borderline
Roff24170315430 Alkaloid T3O medium borderline
Roff24470324280 Alkaloid T3O low borderline
Roff24530326030 Alkaloid T3O medium borderline
Roff24960330510 Alkaloid T3O medium pass
Roff25210336530 Alkaloid T3O medium borderline
Roff25300342070 Alkaloid T3O medium borderline
Roff25300342090 Alkaloid T3O medium borderline
Roff25970347110 Alkaloid T3O medium borderline
Roff26200349060 Alkaloid T3O medium borderline
Roff26200349070 Alkaloid T3O medium borderline
Roff26200349470 Alkaloid T3O medium borderline
Roff26200349570 Alkaloid T3O medium borderline
Roff26200349720 Alkaloid T3O medium pass
Roff26200349730 Alkaloid T3O medium pass
Roff26630353250 Alkaloid T3O medium borderline
Roff26630353270 Alkaloid T3O medium borderline
Roff2708210357750 Alkaloid T3O medium pass
Roff27430359470 Alkaloid T3O medium borderline
Roff27430361290 Alkaloid T3O medium borderline
Roff27430361510 Alkaloid T3O medium borderline
Roff27430362460 Alkaloid T3O medium pass
Roff28570368770 Alkaloid T3O medium borderline
Roff28570368780 Alkaloid T3O medium borderline
Roff2894870370260 Alkaloid T3O medium borderline
Roff2896650370460 Alkaloid T3O medium borderline