PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
Roff2924320373320 Alkaloid T3O medium borderline
Roff2926030373600 Alkaloid T3O medium borderline
Roff2953410375150 Alkaloid T3O medium borderline
Roff3104540377700 Alkaloid T3O medium borderline
Roff3137290378300 Alkaloid T3O medium borderline
Roff3236230381310 Alkaloid T3O medium borderline
Roff3247400381970 Alkaloid T3O medium borderline
Roff3259240382750 Alkaloid T3O medium pass
Roff3297100384370 Alkaloid T3O medium borderline
Roff3303940385080 Alkaloid T3O low borderline
Roff3323720386280 Alkaloid T3O medium borderline
Roff3332220387460 Alkaloid T3O medium borderline
Roff3417090391760 Alkaloid T3O medium borderline
Roff3421910392160 Alkaloid T3O medium borderline
Roff3421910392170 Alkaloid T3O medium borderline
Roff3453600393490 Alkaloid T3O medium pass
Roff3480840396120 Alkaloid T3O medium borderline
Roff3480840396130 Alkaloid T3O medium borderline
Roff3498240398370 Alkaloid T3O medium borderline
Roff3541250401250 Alkaloid T3O medium borderline
Roff3555760402200 Alkaloid T3O medium borderline
Roff3557590402320 Alkaloid T3O medium borderline
Roff3577990404420 Alkaloid T3O medium borderline
Roff3593250405770 Alkaloid T3O medium borderline
Roff3637950408790 Alkaloid T3O medium borderline
Roff3669610412160 Alkaloid T3O medium borderline
Roff3669610412170 Alkaloid T3O medium borderline
Roff3671720412400 Alkaloid T3O medium borderline
Roff3702730415600 Alkaloid T3O medium borderline
Roff3705800416300 Alkaloid T3O medium borderline
Roff3707840416590 Alkaloid T3O medium borderline
Roff3723010418290 Alkaloid T3O low borderline
Roff3728740418920 Alkaloid T3O low borderline
Roff3759400424470 Alkaloid T3O medium borderline
Roff3759400424480 Alkaloid T3O medium borderline
Roff3772000426530 Alkaloid T3O low borderline
Roff3776110427010 Alkaloid T3O medium borderline
Roff3776110427020 Alkaloid T3O medium borderline
Roff3779250427710 Alkaloid T3O medium borderline
Roff3780590428380 Alkaloid T3O medium borderline
Roff3811970434160 Alkaloid T3O medium borderline
Roff3811970434180 Alkaloid T3O medium borderline
Roff3828530437200 Alkaloid T3O medium borderline
Roff3835820439220 Alkaloid T3O medium pass
Roff3835820439230 Alkaloid T3O medium pass
Roff3841980440550 Alkaloid T3O medium borderline
Roff3864640448010 Alkaloid T3O low borderline
Roff3879270452990 Alkaloid T3O medium borderline
Roff3879570453250 Alkaloid T3O medium borderline
Roff3880740453450 Alkaloid T3O medium borderline