Rosmarinus officinalis (rosmarinus_officinalis)
Imported from atlas release summary for Rosmarinus officinalis.
2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2162
Candidate Genes
C4H
6.93%
BAHD
6.39%
C3'H/CYP98A
6.13%
4CL
4.33%
IFS
4.27%
T3O
4.04%
CYP76
4.01%
POD
3.47%
Other Families
60.43%
More Families (97)
UGT
194
3.45%
NMT
180
3.21%
7DLGT
179
3.19%
UFGT
179
3.19%
DWF4/CYP90B1
155
2.76%
F3H
129
2.3%
F3'H/CYP75B
124
2.21%
BR6OX2/CYP85A2
111
1.98%
STR
106
1.89%
CYP71
84
1.5%
CODM/T6ODM
83
1.48%
SMT1/SMT2/SMT3
74
1.32%
IFR
69
1.23%
LAC
69
1.23%
CAD
62
1.1%
T16H
57
1.01%
CAS
55
0.98%
GS
52
0.93%
H6H
50
0.89%
PYKS
49
0.87%
TPS
49
0.87%
HCT
48
0.85%
GES
45
0.8%
TRI/TRII
44
0.78%
BBE
44
0.78%
CSE
42
0.75%
RAS
42
0.75%
7DLH
41
0.73%
TAT
41
0.73%
G8O/G8H
39
0.69%
CYP51G1
36
0.64%
CYP90D1
35
0.62%
PMT
34
0.61%
SLS
33
0.59%
ANR
33
0.59%
FNS
31
0.55%
IO
29
0.52%
F5H/CYP84A
29
0.52%
CCR
29
0.52%
NCS
27
0.48%
COMT
27
0.48%
8HGO
26
0.46%
BR6OX1/CYP85A1
26
0.46%
CPD/CYP90A1
25
0.45%
FPPS
23
0.41%
LAMT
21
0.37%
16OMT
20
0.36%
F3'5'H/CYP75A
20
0.36%
CNMT
19
0.34%
GGPPS
19
0.34%
SGD
15
0.27%
ANS/LDOX
15
0.27%
PAL
15
0.27%
CCoAOMT
15
0.27%
DXS
15
0.27%
PMK
15
0.27%
TYDC_DDC
14
0.25%
CHS
14
0.25%
CPR
14
0.25%
HMGR
13
0.23%
SQS/FDFT1
12
0.21%
ROT3/CYP90C1
12
0.21%
AACT
12
0.21%
MPO
11
0.2%
HPPR
11
0.2%
MVD
11
0.2%
DFR
10
0.18%
COR
9
0.16%
SMO1/SMO2
9
0.16%
CYP80B1
8
0.14%
FLS
8
0.14%
SQE
8
0.14%
ISY
7
0.12%
DET2
7
0.12%
MCT/IspD
7
0.12%
FK
5
0.09%
HDS/IspG
5
0.09%
HDR/IspH
5
0.09%
6OMT_4OMT_SOMT
4
0.07%
CYP719
4
0.07%
CYP80F1
4
0.07%
DWF1
4
0.07%
MVK
4
0.07%
IDI
4
0.07%
ADC
3
0.05%
CHI
3
0.05%
CPI1
3
0.05%
DWF5
3
0.05%
CMK/IspE
3
0.05%
HMGS
3
0.05%
TDC
2
0.04%
DWF7
2
0.04%
HYD1
2
0.04%
DXR
2
0.04%
MDS/IspF
2
0.04%
XMT_MXMT_DXMT
1
0.02%
GPPS
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 685 | 19 | BAHD (284) | View species results |
| Phenylpropanoid pathway | 437 | 11 | POD (182) | View species results |
| Alkaloid pathway | 406 | 21 | NMT (94) | View species results |
| Flavonoid pathway | 263 | 13 | UFGT (168) | View species results |
| Rosmarinic acid pathway | 234 | 7 | C4H (111) | View species results |
| Steroid pathway | 137 | 14 | SMT1/SMT2/SMT3 (48) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 2297 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 449 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Roff10160007970 | Terpenoid | UGT | medium | pass | UGT__00106__sp_Q9SKC5_U74D1_ARATH |
| Roff10160009050 | Terpenoid | UGT | low | borderline | UGT__00055__sp_O48676_U74B1_ARATH |
| Roff10170013780 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| Roff10200017310 | Terpenoid | UGT | medium | pass | UGT__00105__sp_Q9SK82_U85A1_ARATH |
| Roff10200017320 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Roff10200018180 | Terpenoid | UGT | medium | pass | UGT__00070__sp_Q5XF20_U84A1_ARATH |
| Roff10230022430 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Roff10230022440 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Roff10260027260 | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| Roff10270028400 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| Roff10270028410 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| Roff10300044870 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| Roff10340049170 | Terpenoid | UGT | low | borderline | UGT__00065__sp_P0DO72_GT942_SIRGR |
| Roff10420053530 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Roff10440059120 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Roff10440059640 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Roff10440059650 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Roff10440059660 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Roff10490063200 | Terpenoid | UGT | medium | pass | UGT__00116__sp_U3UA11_UGT7_CATRO |
| Roff10880083570 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Roff10910084650 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| Roff11010086300 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Roff11470098180 | Terpenoid | UGT | medium | pass | UGT__00025__sp_C3W7B0_CGT_ORYSI |
| Roff11520101940 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Roff11530104680 | Terpenoid | UGT | medium | pass | UGT__00055__sp_O48676_U74B1_ARATH |
| Roff11530110680 | Terpenoid | UGT | medium | pass | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Roff11530111790 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Roff11530113010 | Terpenoid | UGT | medium | pass | UGT__00064__sp_P0DO71_GT941_SIRGR |
| Roff11530115500 | Terpenoid | UGT | medium | pass | UGT__00026__sp_D3THI6_U7A15_MALDO |
| Roff11660118890 | Terpenoid | UGT | medium | pass | UGT__00080__sp_Q94AB5_U7E12_ARATH |
| Roff11790121760 | Terpenoid | UGT | medium | pass | UGT__00045__sp_K4GKX2_73C10_BARVU |
| Roff11950125880 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Roff11950125890 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Roff11950126470 | Terpenoid | UGT | low | borderline | UGT__00096__sp_Q9LSY8_U71B2_ARATH |
| Roff12350133440 | Terpenoid | UGT | medium | pass | UGT__00033__sp_F8WKW8_UGT9_GARJA |
| Roff12350134120 | Terpenoid | UGT | low | borderline | UGT__00045__sp_K4GKX2_73C10_BARVU |
| Roff12350134130 | Terpenoid | UGT | medium | pass | UGT__00079__sp_Q94A84_U72E1_ARATH |
| Roff12350134140 | Terpenoid | UGT | low | borderline | UGT__00078__sp_Q8W491_U73B3_ARATH |
| Roff12670145120 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Roff12670145130 | Terpenoid | UGT | medium | pass | UGT__00047__sp_K7NBW3_74AC1_SIRGR |
| Roff13100157970 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Roff13100157980 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| Roff13310162880 | Terpenoid | UGT | medium | pass | UGT__00035__sp_I1KEV6_FG3H_SOYBN |
| Roff13310163370 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| Roff13310163380 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| Roff14160176300 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Roff14160176310 | Terpenoid | UGT | medium | pass | UGT__00045__sp_K4GKX2_73C10_BARVU |
| Roff14320180790 | Terpenoid | UGT | medium | pass | UGT__00015__sp_A0A193AU77_GGT24_PUNGR |
| Roff14430186270 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Roff15360198720 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |