PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff3612280407130 Phenylpropanoid C4H/CYP73A low borderline
Roff3879270453000 Phenylpropanoid C4H/CYP73A low borderline
Roff3891950458550 Phenylpropanoid C4H/CYP73A low borderline
Roff3897970462070 Phenylpropanoid C4H/CYP73A low borderline
Roff5661200487360 Phenylpropanoid C4H/CYP73A low borderline
Roff5661210487390 Phenylpropanoid C4H/CYP73A low borderline
Roff5871510492950 Phenylpropanoid C4H/CYP73A low borderline
Roff5871670492970 Phenylpropanoid C4H/CYP73A low borderline
Roff10230022050 Phenylpropanoid CAD low borderline
Roff10280030580 Phenylpropanoid CAD low borderline
Roff10280030620 Phenylpropanoid CAD low borderline
Roff10300045250 Phenylpropanoid CAD low borderline
Roff10330047380 Phenylpropanoid CAD low borderline
Roff10340049420 Phenylpropanoid CAD medium pass
Roff10490063670 Phenylpropanoid CAD low borderline
Roff12730149990 Phenylpropanoid CAD low borderline
Roff12730153030 Phenylpropanoid CAD low borderline
Roff12880156840 Phenylpropanoid CAD low borderline
Roff13130158760 Phenylpropanoid CAD low borderline
Roff13230160880 Phenylpropanoid CAD medium borderline
Roff13230160890 Phenylpropanoid CAD medium borderline
Roff13230160900 Phenylpropanoid CAD medium borderline
Roff13230160910 Phenylpropanoid CAD medium borderline
Roff13230160920 Phenylpropanoid CAD medium borderline
Roff14320179280 Phenylpropanoid CAD medium pass
Roff14320179490 Phenylpropanoid CAD low borderline
Roff14320179990 Phenylpropanoid CAD low borderline
Roff14320180810 Phenylpropanoid CAD medium pass
Roff14320180820 Phenylpropanoid CAD medium pass
Roff15240196670 Phenylpropanoid CAD medium pass
Roff15360200970 Phenylpropanoid CAD medium pass
Roff15360200980 Phenylpropanoid CAD medium pass
Roff15360200990 Phenylpropanoid CAD medium pass
Roff15360202720 Phenylpropanoid CAD medium pass
Roff15960213540 Phenylpropanoid CAD low borderline
Roff20550262510 Phenylpropanoid CAD low borderline
Roff20560263360 Phenylpropanoid CAD medium pass
Roff20560263370 Phenylpropanoid CAD medium pass
Roff22400300090 Phenylpropanoid CAD medium pass
Roff24210319320 Phenylpropanoid CAD medium pass
Roff24210319330 Phenylpropanoid CAD medium pass
Roff24960328360 Phenylpropanoid CAD medium borderline
Roff24960328370 Phenylpropanoid CAD medium borderline
Roff24960330650 Phenylpropanoid CAD medium pass
Roff26150348660 Phenylpropanoid CAD low borderline
Roff27430362810 Phenylpropanoid CAD low borderline
Roff2900220371180 Phenylpropanoid CAD low borderline
Roff29140371580 Phenylpropanoid CAD low borderline
Roff3263640383090 Phenylpropanoid CAD medium borderline
Roff3303000384830 Phenylpropanoid CAD medium pass