PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff5851620492390 Steroid DWF4/CYP90B1 low borderline
Roff5851620492400 Steroid DWF4/CYP90B1 low borderline
Roff5871460492900 Steroid DWF4/CYP90B1 low borderline
Roff5871470492920 Steroid DWF4/CYP90B1 low borderline
Roff8110495380 Steroid DWF4/CYP90B1 low borderline
Roff8110495390 Steroid DWF4/CYP90B1 low borderline
Roff8110498870 Steroid DWF4/CYP90B1 low borderline
Roff12210129800 Steroid DWF5 medium pass
Roff14370183640 Steroid DWF5 medium borderline
Roff14370183650 Steroid DWF5 medium pass
Roff10420055670 Steroid DWF7 medium pass
Roff27850365480 Steroid DWF7 medium pass
Roff11520102760 Steroid FK high pass
Roff24030308460 Steroid FK medium borderline
Roff24030308470 Steroid FK medium borderline
Roff24030308480 Steroid FK medium pass
Roff24030308490 Steroid FK medium pass
Roff3936850478640 Steroid HYD1 high pass
Roff3936850478650 Steroid HYD1 medium pass
Roff10230023010 Steroid ROT3/CYP90C1 medium borderline
Roff10290031740 Steroid ROT3/CYP90C1 low borderline
Roff10300036130 Steroid ROT3/CYP90C1 low borderline
Roff10420052140 Steroid ROT3/CYP90C1 medium borderline
Roff10420052150 Steroid ROT3/CYP90C1 medium borderline
Roff10960085070 Steroid ROT3/CYP90C1 medium borderline
Roff12350133970 Steroid ROT3/CYP90C1 low borderline
Roff13510168790 Steroid ROT3/CYP90C1 medium borderline
Roff14290178330 Steroid ROT3/CYP90C1 low borderline
Roff15910210270 Steroid ROT3/CYP90C1 medium borderline
Roff26200349720 Steroid ROT3/CYP90C1 medium borderline
Roff26200349730 Steroid ROT3/CYP90C1 medium borderline
Roff10300044910 Steroid SMO1/SMO2 medium pass
Roff10490063270 Steroid SMO1/SMO2 medium pass
Roff16660217290 Steroid SMO1/SMO2 medium pass
Roff23680303880 Steroid SMO1/SMO2 low borderline
Roff3248590382290 Steroid SMO1/SMO2 medium pass
Roff3339140388450 Steroid SMO1/SMO2 medium pass
Roff3411570391160 Steroid SMO1/SMO2 medium pass
Roff3411570391170 Steroid SMO1/SMO2 medium pass
Roff3864500447850 Steroid SMO1/SMO2 medium pass
Roff10160005090 Steroid SMT1/SMT2/SMT3 low borderline
Roff10160005820 Steroid SMT1/SMT2/SMT3 medium pass
Roff10160005830 Steroid SMT1/SMT2/SMT3 medium pass
Roff10240024120 Steroid SMT1/SMT2/SMT3 medium pass
Roff10300033710 Steroid SMT1/SMT2/SMT3 medium pass
Roff10300039450 Steroid SMT1/SMT2/SMT3 low borderline
Roff10590072950 Steroid SMT1/SMT2/SMT3 medium pass
Roff11470098520 Steroid SMT1/SMT2/SMT3 low borderline
Roff11470098530 Steroid SMT1/SMT2/SMT3 low borderline
Roff11520100780 Steroid SMT1/SMT2/SMT3 low borderline