PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff8210506420 Terpenoid GGPPS medium borderline
Roff8210506430 Terpenoid GGPPS medium borderline
Roff8210506440 Terpenoid GGPPS medium borderline
Roff3483000396570 Terpenoid GPPS low borderline
Roff14410185140 Terpenoid HDR/IspH high pass
Roff14410185150 Terpenoid HDR/IspH high pass
Roff3637870408640 Terpenoid HDR/IspH high pass
Roff3637870408650 Terpenoid HDR/IspH high pass
Roff3637870408660 Terpenoid HDR/IspH high pass
Roff10490064320 Terpenoid HDS/IspG high pass
Roff10490064330 Terpenoid HDS/IspG high pass
Roff10590076970 Terpenoid HDS/IspG high pass
Roff24960328650 Terpenoid HDS/IspG high pass
Roff24960328660 Terpenoid HDS/IspG high pass
Roff10420051480 Terpenoid HMGR medium pass
Roff11530108580 Terpenoid HMGR medium pass
Roff11530108590 Terpenoid HMGR medium pass
Roff21350279280 Terpenoid HMGR medium pass
Roff24450323540 Terpenoid HMGR medium pass
Roff25230336920 Terpenoid HMGR low borderline
Roff2813290367050 Terpenoid HMGR medium pass
Roff3394790390610 Terpenoid HMGR medium pass
Roff3494960397540 Terpenoid HMGR medium pass
Roff3544720401960 Terpenoid HMGR medium pass
Roff3587600405090 Terpenoid HMGR medium pass
Roff6114160494010 Terpenoid HMGR medium pass
Roff6114170494020 Terpenoid HMGR medium pass
Roff11240092910 Terpenoid HMGS medium pass
Roff11240092920 Terpenoid HMGS high pass
Roff3890890457180 Terpenoid HMGS high pass
Roff17470223730 Terpenoid IDI medium pass
Roff18450236050 Terpenoid IDI medium pass
Roff18450236060 Terpenoid IDI medium pass
Roff3940280480590 Terpenoid IDI medium pass
Roff10240025290 Terpenoid MCT/IspD low borderline
Roff10590073960 Terpenoid MCT/IspD low borderline
Roff10590073970 Terpenoid MCT/IspD low borderline
Roff10590073980 Terpenoid MCT/IspD low borderline
Roff10590073990 Terpenoid MCT/IspD low borderline
Roff12660141520 Terpenoid MCT/IspD high pass
Roff24170316180 Terpenoid MCT/IspD high pass
Roff20730268610 Terpenoid MDS/IspF high pass
Roff3940140480470 Terpenoid MDS/IspF high pass
Roff10230021450 Terpenoid MVD low borderline
Roff10260027410 Terpenoid MVD medium pass
Roff10260027420 Terpenoid MVD medium pass
Roff10520071120 Terpenoid MVD low borderline
Roff11530112590 Terpenoid MVD low borderline
Roff11530112700 Terpenoid MVD medium pass
Roff22280298640 Terpenoid MVD low borderline