PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff2685750355830 Terpenoid MVD low borderline
Roff2685750355840 Terpenoid MVD low borderline
Roff3699100415010 Terpenoid MVD low borderline
Roff3699100415020 Terpenoid MVD low borderline
Roff10270030260 Terpenoid MVK medium pass
Roff10440058310 Terpenoid MVK low borderline
Roff18440235680 Terpenoid MVK medium pass
Roff3571500403230 Terpenoid MVK medium pass
Roff11030086900 Terpenoid PMK low borderline
Roff12880156660 Terpenoid PMK low borderline
Roff21780291250 Terpenoid PMK low borderline
Roff2728080359190 Terpenoid PMK low borderline
Roff2728660359200 Terpenoid PMK medium pass
Roff2970900375650 Terpenoid PMK medium pass
Roff2970900375660 Terpenoid PMK medium pass
Roff3154550379500 Terpenoid PMK low borderline
Roff3514420400130 Terpenoid PMK low borderline
Roff3687870413990 Terpenoid PMK medium pass
Roff3748800422710 Terpenoid PMK medium pass
Roff3754920423620 Terpenoid PMK low borderline
Roff3805640432820 Terpenoid PMK medium pass
Roff3846440442480 Terpenoid PMK low borderline
Roff3945580481690 Terpenoid PMK low borderline
Roff10190016740 Terpenoid TPS medium pass
Roff10300045250 Terpenoid TPS medium pass
Roff10490063660 Terpenoid TPS medium pass
Roff10490063670 Terpenoid TPS medium pass
Roff10690082180 Terpenoid TPS medium pass
Roff12730151860 Terpenoid TPS medium pass
Roff14320179280 Terpenoid TPS medium pass
Roff14320179490 Terpenoid TPS medium pass
Roff14320179990 Terpenoid TPS medium pass
Roff15960213540 Terpenoid TPS medium pass
Roff21790291830 Terpenoid TPS medium pass
Roff24960330650 Terpenoid TPS medium pass
Roff26150348650 Terpenoid TPS medium pass
Roff26150348660 Terpenoid TPS medium pass
Roff27430362810 Terpenoid TPS medium pass
Roff27960366120 Terpenoid TPS medium pass
Roff28430368310 Terpenoid TPS medium pass
Roff2900220371180 Terpenoid TPS medium pass
Roff3303000384830 Terpenoid TPS medium pass
Roff3321700386140 Terpenoid TPS medium pass
Roff3333170387540 Terpenoid TPS medium pass
Roff3419160392050 Terpenoid TPS medium pass
Roff3455420393870 Terpenoid TPS medium pass
Roff3473740395370 Terpenoid TPS medium pass
Roff3473740395380 Terpenoid TPS medium pass
Roff3482650396470 Terpenoid TPS medium pass
Roff3576570404090 Terpenoid TPS medium pass