PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff2900220371180 Alkaloid GES medium pass
Roff3303000384830 Alkaloid GES medium pass
Roff3321700386140 Alkaloid GES medium pass
Roff3333170387540 Alkaloid GES medium pass
Roff3419160392050 Alkaloid GES medium pass
Roff3455420393870 Alkaloid GES medium pass
Roff3473740395370 Alkaloid GES medium pass
Roff3473740395380 Alkaloid GES medium pass
Roff3576570404090 Alkaloid GES medium pass
Roff3593520405840 Alkaloid GES medium pass
Roff3622000407540 Alkaloid GES medium pass
Roff3719220417680 Alkaloid GES medium pass
Roff3816900434900 Alkaloid GES medium pass
Roff3828140437160 Alkaloid GES medium pass
Roff3840800440430 Alkaloid GES medium pass
Roff3877660452650 Alkaloid GES medium pass
Roff3877660452660 Alkaloid GES medium pass
Roff3877660452670 Alkaloid GES low borderline
Roff3894260459640 Alkaloid GES medium pass
Roff3897910461990 Alkaloid GES medium pass
Roff3900160462950 Alkaloid GES medium pass
Roff3924130473830 Alkaloid GES medium pass
Roff4409590483770 Alkaloid GES medium pass
Roff4409590483780 Alkaloid GES medium pass
Roff4409600483800 Alkaloid GES medium pass
Roff8210499720 Alkaloid GES medium pass
Roff8210502190 Alkaloid GES medium pass
Roff8210507770 Alkaloid GES medium pass
Roff10160003070 Alkaloid GS low borderline
Roff10160008350 Alkaloid GS low borderline
Roff10230022050 Alkaloid GS low borderline
Roff10280030580 Alkaloid GS low borderline
Roff10300039780 Alkaloid GS low borderline
Roff10300043370 Alkaloid GS low borderline
Roff10330047370 Alkaloid GS low borderline
Roff10330047380 Alkaloid GS low borderline
Roff10340049420 Alkaloid GS high pass
Roff11530103770 Alkaloid GS low borderline
Roff12830155380 Alkaloid GS medium pass
Roff13130158750 Alkaloid GS low borderline
Roff13130158760 Alkaloid GS low borderline
Roff13360167620 Alkaloid GS low borderline
Roff14320180810 Alkaloid GS high pass
Roff14320180820 Alkaloid GS high pass
Roff14430186640 Alkaloid GS low borderline
Roff14430186650 Alkaloid GS low borderline
Roff14430186660 Alkaloid GS low borderline
Roff15240196670 Alkaloid GS high pass
Roff15280198310 Alkaloid GS medium pass
Roff15360200930 Alkaloid GS medium pass