PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff15360200970 Alkaloid GS medium pass
Roff15360200980 Alkaloid GS medium pass
Roff15360200990 Alkaloid GS medium pass
Roff15360202720 Alkaloid GS high pass
Roff20560263360 Alkaloid GS high pass
Roff20560263370 Alkaloid GS high pass
Roff22400300090 Alkaloid GS high pass
Roff24210319320 Alkaloid GS high pass
Roff24210319330 Alkaloid GS high pass
Roff24960329230 Alkaloid GS low borderline
Roff3105990377760 Alkaloid GS low borderline
Roff3498090398250 Alkaloid GS low borderline
Roff3506860399230 Alkaloid GS high pass
Roff3520080400520 Alkaloid GS low borderline
Roff3593790405850 Alkaloid GS low borderline
Roff3643910409710 Alkaloid GS low borderline
Roff3801080431910 Alkaloid GS low borderline
Roff3876140451850 Alkaloid GS low borderline
Roff3876140451860 Alkaloid GS low borderline
Roff3876140451870 Alkaloid GS low borderline
Roff3877580452580 Alkaloid GS high pass
Roff3899790462610 Alkaloid GS medium pass
Roff4310660483370 Alkaloid GS high pass
Roff4310670483380 Alkaloid GS high pass
Roff5896800493380 Alkaloid GS low borderline
Roff5896800493390 Alkaloid GS low borderline
Roff5896820493440 Alkaloid GS low borderline
Roff8110496710 Alkaloid GS high pass
Roff8210502870 Alkaloid GS low borderline
Roff8300510260 Alkaloid GS high pass
Roff10590078810 Alkaloid H6H low borderline
Roff11520102400 Alkaloid H6H medium borderline
Roff11530111340 Alkaloid H6H low borderline
Roff11530116210 Alkaloid H6H low borderline
Roff11530116220 Alkaloid H6H low borderline
Roff11530116240 Alkaloid H6H low borderline
Roff11530116250 Alkaloid H6H low borderline
Roff11530116260 Alkaloid H6H low borderline
Roff11530116270 Alkaloid H6H low borderline
Roff11530116720 Alkaloid H6H low borderline
Roff11530117390 Alkaloid H6H low borderline
Roff11730119910 Alkaloid H6H medium borderline
Roff11860123610 Alkaloid H6H low borderline
Roff12730152760 Alkaloid H6H medium borderline
Roff13310163500 Alkaloid H6H low borderline
Roff13310163510 Alkaloid H6H low borderline
Roff14410185500 Alkaloid H6H low borderline
Roff14530189870 Alkaloid H6H low borderline
Roff15360200560 Alkaloid H6H medium pass
Roff15360202450 Alkaloid H6H low borderline