PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff3841950440540 Steroid SMT1/SMT2/SMT3 medium pass
Roff3902370464140 Steroid SMT1/SMT2/SMT3 medium pass
Roff3926630474730 Steroid SMT1/SMT2/SMT3 low borderline
Roff3926630474740 Steroid SMT1/SMT2/SMT3 medium pass
Roff3926800474800 Steroid SMT1/SMT2/SMT3 medium pass
Roff3926800474810 Steroid SMT1/SMT2/SMT3 medium pass
Roff3926800474820 Steroid SMT1/SMT2/SMT3 medium pass
Roff3926800474830 Steroid SMT1/SMT2/SMT3 medium pass
Roff3926800474840 Steroid SMT1/SMT2/SMT3 medium pass
Roff3926800474850 Steroid SMT1/SMT2/SMT3 medium pass
Roff3930390476720 Steroid SMT1/SMT2/SMT3 low borderline
Roff5900150493540 Steroid SMT1/SMT2/SMT3 medium pass
Roff8300509400 Steroid SMT1/SMT2/SMT3 medium pass
Roff8300509410 Steroid SMT1/SMT2/SMT3 medium pass
Roff10420056500 Steroid SQE medium pass
Roff10440057890 Steroid SQE medium pass
Roff11530109070 Steroid SQE medium pass
Roff11530111480 Steroid SQE medium pass
Roff11530111490 Steroid SQE medium pass
Roff24190318010 Steroid SQE medium pass
Roff2941530374610 Steroid SQE medium pass
Roff3495000397620 Steroid SQE medium pass
Roff10230022710 Steroid SQS/FDFT1 low borderline
Roff11530109590 Steroid SQS/FDFT1 high pass
Roff13680171670 Steroid SQS/FDFT1 medium pass
Roff13680171680 Steroid SQS/FDFT1 medium pass
Roff21440284000 Steroid SQS/FDFT1 high pass
Roff24130313120 Steroid SQS/FDFT1 high pass
Roff24190317600 Steroid SQS/FDFT1 high pass
Roff24190317610 Steroid SQS/FDFT1 high pass
Roff2680090354470 Steroid SQS/FDFT1 medium pass
Roff3901420463540 Steroid SQS/FDFT1 low borderline
Roff3901420463550 Steroid SQS/FDFT1 low borderline
Roff3901420463570 Steroid SQS/FDFT1 low borderline