PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Roff15360199850 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Roff15360199860 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Roff15360199870 Alkaloid NMT medium pass NMT__00021__sp_O64827_SUVR5_ARATH
Roff15360202310 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Roff16390214970 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
Roff16590216400 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
Roff16590216410 Alkaloid NMT low borderline NMT__00054__sp_Q9FF80_SUVH1_ARATH
Roff16640217080 Alkaloid NMT medium pass NMT__00028__sp_Q2LAE1_ASHH2_ARATH
Roff16680217880 Alkaloid NMT medium borderline NMT__00029__sp_Q42963_PMT1_TOBAC
Roff17600225290 Alkaloid NMT medium borderline NMT__00023__sp_O82210_ANM12_ARATH
Roff18120232240 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Roff18450237120 Alkaloid NMT medium pass NMT__00048__sp_Q8W595_SUVR4_ARATH
Roff19070248230 Alkaloid NMT medium borderline NMT__00066__sp_Q9SU94_ANM11_ARATH
Roff19140248460 Alkaloid NMT medium pass NMT__00061__sp_Q9SAH5_PLMT_ARATH
Roff19200248970 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200248980 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200248990 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200249000 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200249010 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200249020 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19200249030 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff19530252030 Alkaloid NMT medium pass NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Roff19950257330 Alkaloid NMT medium pass NMT__00067__sp_Q9T0G7_SUVH9_ARATH
Roff20400261060 Alkaloid NMT medium pass NMT__00024__sp_P0CB22_ATX2_ARATH
Roff21140272430 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Roff21180275010 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Roff21180275020 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Roff21350279020 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Roff21690289890 Alkaloid NMT medium borderline NMT__00053__sp_Q9C6B9_PEAM3_ARATH
Roff21990296520 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
Roff22580303290 Alkaloid NMT medium borderline NMT__00057__sp_Q9FR44_PEAM1_ARATH
Roff23870304890 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Roff23870304900 Alkaloid NMT medium pass NMT__00025__sp_P93831_CLF_ARATH
Roff24030308800 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
Roff24100312080 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Roff24100312090 Alkaloid NMT medium pass NMT__00039__sp_Q84W92_ANM13_ARATH
Roff24200318810 Alkaloid NMT low borderline NMT__00024__sp_P0CB22_ATX2_ARATH
Roff24450322490 Alkaloid NMT medium pass NMT__00040__sp_Q84WW6_ASHH1_ARATH
Roff24680326440 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Roff24680326450 Alkaloid NMT medium pass NMT__00016__sp_F4JNX3_CMKMT_ARATH
Roff24750326780 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Roff24750326790 Alkaloid NMT medium borderline NMT__00007__sp_A0A6C0WX00_CKTBS_CAMSB
Roff25260338430 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Roff25260338440 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
Roff25300341930 Alkaloid NMT medium pass NMT__00049__sp_Q93YF5_SUVH1_TOBAC
Roff25630343300 Alkaloid NMT medium pass NMT__00060__sp_Q9MAT5_ANM10_ARATH
Roff26540353190 Alkaloid NMT medium pass NMT__00027__sp_Q10MI4_EZ1_ORYSJ
Roff26640353470 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
Roff2681960355130 Alkaloid NMT medium borderline NMT__00050__sp_Q944H0_PEAM2_ARATH
Roff27430361850 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH