PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Roff24020307560 Flavonoid 4CL medium pass
Roff24020307570 Flavonoid 4CL medium pass
Roff24160314270 Flavonoid 4CL low borderline
Roff24450323900 Flavonoid 4CL medium pass
Roff24450323910 Flavonoid 4CL medium pass
Roff24450323920 Flavonoid 4CL medium pass
Roff24960328030 Flavonoid 4CL medium pass
Roff25090332860 Flavonoid 4CL medium pass
Roff25220336570 Flavonoid 4CL medium pass
Roff26820355210 Flavonoid 4CL medium pass
Roff27430359820 Flavonoid 4CL low borderline
Roff2799070366430 Flavonoid 4CL low borderline
Roff2898070370900 Flavonoid 4CL medium pass
Roff29180372820 Flavonoid 4CL low borderline
Roff29180372830 Flavonoid 4CL low borderline
Roff3265700383220 Flavonoid 4CL low borderline
Roff3482370396290 Flavonoid 4CL medium pass
Roff3497610398030 Flavonoid 4CL medium pass
Roff3534240400920 Flavonoid 4CL medium pass
Roff3745230422210 Flavonoid 4CL low borderline
Roff3834700439020 Flavonoid 4CL low borderline
Roff3834700439030 Flavonoid 4CL low borderline
Roff3930660476780 Flavonoid 4CL medium pass
Roff3935230478160 Flavonoid 4CL medium pass
Roff4219520483060 Flavonoid 4CL medium pass
Roff4219530483090 Flavonoid 4CL medium pass
Roff4245130483140 Flavonoid 4CL medium pass
Roff4245140483170 Flavonoid 4CL medium pass
Roff8110497100 Flavonoid 4CL medium pass
Roff8110497230 Flavonoid 4CL medium pass
Roff8300509080 Flavonoid 4CL low borderline
Roff11470096540 Flavonoid ANR low borderline
Roff11530110910 Flavonoid ANR low borderline
Roff11790120940 Flavonoid ANR low borderline
Roff13230160880 Flavonoid ANR medium borderline
Roff13230160890 Flavonoid ANR medium borderline
Roff13230160900 Flavonoid ANR medium borderline
Roff13230160910 Flavonoid ANR medium borderline
Roff13230160920 Flavonoid ANR medium borderline
Roff13310162670 Flavonoid ANR medium borderline
Roff13310162680 Flavonoid ANR medium borderline
Roff13310162690 Flavonoid ANR medium borderline
Roff13310162700 Flavonoid ANR medium borderline
Roff14160176560 Flavonoid ANR low borderline
Roff14430186380 Flavonoid ANR low borderline
Roff19140248380 Flavonoid ANR medium borderline
Roff21810292730 Flavonoid ANR low borderline
Roff21810292740 Flavonoid ANR medium pass
Roff21810295030 Flavonoid ANR low borderline
Roff21810295040 Flavonoid ANR medium borderline