PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Roff24020307560 Phenylpropanoid 4CL medium pass
Roff24020307570 Phenylpropanoid 4CL medium pass
Roff24160314270 Phenylpropanoid 4CL low borderline
Roff24450323900 Phenylpropanoid 4CL medium pass
Roff24450323910 Phenylpropanoid 4CL medium pass
Roff24450323920 Phenylpropanoid 4CL medium pass
Roff24960328030 Phenylpropanoid 4CL medium pass
Roff25090332860 Phenylpropanoid 4CL medium pass
Roff25220336570 Phenylpropanoid 4CL medium pass
Roff26820355210 Phenylpropanoid 4CL medium pass
Roff27430359820 Phenylpropanoid 4CL low borderline
Roff2799070366430 Phenylpropanoid 4CL low borderline
Roff2898070370900 Phenylpropanoid 4CL medium pass
Roff29180372820 Phenylpropanoid 4CL low borderline
Roff29180372830 Phenylpropanoid 4CL low borderline
Roff3265700383220 Phenylpropanoid 4CL low borderline
Roff3482370396290 Phenylpropanoid 4CL medium pass
Roff3497610398030 Phenylpropanoid 4CL medium pass
Roff3534240400920 Phenylpropanoid 4CL medium pass
Roff3745230422210 Phenylpropanoid 4CL low borderline
Roff3834700439020 Phenylpropanoid 4CL low borderline
Roff3834700439030 Phenylpropanoid 4CL low borderline
Roff3930660476780 Phenylpropanoid 4CL medium pass
Roff3935230478160 Phenylpropanoid 4CL medium pass
Roff4219520483060 Phenylpropanoid 4CL medium pass
Roff4219530483090 Phenylpropanoid 4CL medium pass
Roff4245130483140 Phenylpropanoid 4CL medium pass
Roff4245140483170 Phenylpropanoid 4CL medium pass
Roff8110497100 Phenylpropanoid 4CL medium pass
Roff8110497230 Phenylpropanoid 4CL medium pass
Roff8300509080 Phenylpropanoid 4CL low borderline
Roff10160004550 Phenylpropanoid C3'H/CYP98A medium borderline
Roff10160006380 Phenylpropanoid C3'H/CYP98A low borderline
Roff10160008020 Phenylpropanoid C3'H/CYP98A low borderline
Roff10170011250 Phenylpropanoid C3'H/CYP98A low borderline
Roff10170011800 Phenylpropanoid C3'H/CYP98A low borderline
Roff10170012910 Phenylpropanoid C3'H/CYP98A medium borderline
Roff10170013410 Phenylpropanoid C3'H/CYP98A medium borderline
Roff10170013420 Phenylpropanoid C3'H/CYP98A medium borderline
Roff10170014460 Phenylpropanoid C3'H/CYP98A low borderline
Roff10170014470 Phenylpropanoid C3'H/CYP98A low borderline
Roff10170014480 Phenylpropanoid C3'H/CYP98A low borderline
Roff10230020320 Phenylpropanoid C3'H/CYP98A low borderline
Roff10230022960 Phenylpropanoid C3'H/CYP98A medium borderline
Roff10230022970 Phenylpropanoid C3'H/CYP98A low borderline
Roff10230022980 Phenylpropanoid C3'H/CYP98A low borderline
Roff10230022990 Phenylpropanoid C3'H/CYP98A low borderline
Roff10230023000 Phenylpropanoid C3'H/CYP98A low borderline
Roff10230023010 Phenylpropanoid C3'H/CYP98A low borderline
Roff10240023590 Phenylpropanoid C3'H/CYP98A medium borderline