PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff12600141150 Alkaloid PYKS low borderline
Roff12670145100 Alkaloid PYKS low borderline
Roff14410184780 Alkaloid PYKS low borderline
Roff14510188750 Alkaloid PYKS low borderline
Roff14510188760 Alkaloid PYKS low borderline
Roff14530190010 Alkaloid PYKS low borderline
Roff15910210280 Alkaloid PYKS low borderline
Roff17220221300 Alkaloid PYKS high pass
Roff18070229780 Alkaloid PYKS low borderline
Roff18700242020 Alkaloid PYKS low borderline
Roff18930244820 Alkaloid PYKS low borderline
Roff21350281840 Alkaloid PYKS low borderline
Roff21350281880 Alkaloid PYKS low borderline
Roff24100312290 Alkaloid PYKS low borderline
Roff24130312960 Alkaloid PYKS high pass
Roff24680326290 Alkaloid PYKS low borderline
Roff25240337970 Alkaloid PYKS low borderline
Roff25260340740 Alkaloid PYKS low borderline
Roff2680640354740 Alkaloid PYKS low borderline
Roff26840355750 Alkaloid PYKS high pass
Roff26910356740 Alkaloid PYKS high pass
Roff27760365170 Alkaloid PYKS low borderline
Roff2983940375880 Alkaloid PYKS high pass
Roff3259440382760 Alkaloid PYKS low borderline
Roff3494810397380 Alkaloid PYKS low borderline
Roff3735170419710 Alkaloid PYKS low borderline
Roff3767170425660 Alkaloid PYKS low borderline
Roff3768090425910 Alkaloid PYKS low borderline
Roff3856740445070 Alkaloid PYKS low borderline
Roff3865040448080 Alkaloid PYKS high pass
Roff3886650455410 Alkaloid PYKS low borderline
Roff3897040461760 Alkaloid PYKS low borderline
Roff3907810466860 Alkaloid PYKS low borderline
Roff3921230472720 Alkaloid PYKS low borderline
Roff3938330479310 Alkaloid PYKS low borderline
Roff3941080480830 Alkaloid PYKS low borderline
Roff8300508530 Alkaloid PYKS low borderline
Roff8300512460 Alkaloid PYKS low borderline
Roff10300045190 Alkaloid SGD low borderline
Roff10590078420 Alkaloid SGD medium pass
Roff12550139090 Alkaloid SGD medium pass
Roff12720149520 Alkaloid SGD medium pass
Roff15940212790 Alkaloid SGD medium pass
Roff15940212800 Alkaloid SGD medium pass
Roff15940212810 Alkaloid SGD medium pass
Roff15940212820 Alkaloid SGD medium pass
Roff15940212830 Alkaloid SGD medium pass
Roff22430300470 Alkaloid SGD low borderline
Roff27430362780 Alkaloid SGD medium pass
Roff3672850412770 Alkaloid SGD medium pass