PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff3891400457770 Alkaloid T3O medium borderline
Roff3891950458560 Alkaloid T3O medium borderline
Roff3897970462070 Alkaloid T3O low borderline
Roff3900160462940 Alkaloid T3O medium borderline
Roff3900160462960 Alkaloid T3O medium borderline
Roff3900160462970 Alkaloid T3O medium borderline
Roff3900160462990 Alkaloid T3O medium borderline
Roff3918300470890 Alkaloid T3O low borderline
Roff3934860477900 Alkaloid T3O medium borderline
Roff3938330479630 Alkaloid T3O medium borderline
Roff5661210487380 Alkaloid T3O medium borderline
Roff5851610492350 Alkaloid T3O medium borderline
Roff5851620492390 Alkaloid T3O medium borderline
Roff5851620492400 Alkaloid T3O medium borderline
Roff5851630492410 Alkaloid T3O medium borderline
Roff5851640492430 Alkaloid T3O medium borderline
Roff5871460492890 Alkaloid T3O medium borderline
Roff5871470492910 Alkaloid T3O medium borderline
Roff8110495070 Alkaloid T3O medium borderline
Roff8110495380 Alkaloid T3O medium borderline
Roff8110495390 Alkaloid T3O medium borderline
Roff8110495540 Alkaloid T3O medium borderline
Roff8110495550 Alkaloid T3O medium borderline
Roff8110498260 Alkaloid T3O low borderline
Roff8110498870 Alkaloid T3O medium borderline
Roff8300509100 Alkaloid T3O low borderline
Roff14280177640 Alkaloid TDC low borderline
Roff14280177650 Alkaloid TDC low borderline
Roff10160004150 Alkaloid TRI/TRII medium pass
Roff10270028710 Alkaloid TRI/TRII medium pass
Roff10270030270 Alkaloid TRI/TRII medium pass
Roff10490063250 Alkaloid TRI/TRII medium pass
Roff10490063260 Alkaloid TRI/TRII medium pass
Roff10510068050 Alkaloid TRI/TRII medium pass
Roff10510070520 Alkaloid TRI/TRII medium pass
Roff10510070530 Alkaloid TRI/TRII low borderline
Roff11110089260 Alkaloid TRI/TRII medium pass
Roff11530114510 Alkaloid TRI/TRII medium pass
Roff12370135470 Alkaloid TRI/TRII medium pass
Roff12370135780 Alkaloid TRI/TRII low borderline
Roff12580140240 Alkaloid TRI/TRII medium pass
Roff12670144210 Alkaloid TRI/TRII medium pass
Roff12720149530 Alkaloid TRI/TRII medium pass
Roff12720149540 Alkaloid TRI/TRII medium pass
Roff14410185700 Alkaloid TRI/TRII low borderline
Roff14530189280 Alkaloid TRI/TRII medium pass
Roff14700191580 Alkaloid TRI/TRII medium pass
Roff14700192820 Alkaloid TRI/TRII medium pass
Roff15260196980 Alkaloid TRI/TRII medium pass
Roff16770218930 Alkaloid TRI/TRII low borderline