PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Roff20400261560 Alkaloid 7DLGT medium pass
Roff21180274540 Alkaloid 7DLGT low borderline
Roff21180274550 Alkaloid 7DLGT low borderline
Roff21180274560 Alkaloid 7DLGT low borderline
Roff21540286810 Alkaloid 7DLGT low borderline
Roff21540286820 Alkaloid 7DLGT low borderline
Roff21540286830 Alkaloid 7DLGT low borderline
Roff21810293300 Alkaloid 7DLGT low borderline
Roff21810293310 Alkaloid 7DLGT low borderline
Roff2223600298030 Alkaloid 7DLGT medium pass
Roff2223600298040 Alkaloid 7DLGT medium pass
Roff22310299090 Alkaloid 7DLGT medium pass
Roff22310299100 Alkaloid 7DLGT low borderline
Roff22310299110 Alkaloid 7DLGT medium pass
Roff22310299120 Alkaloid 7DLGT medium pass
Roff22310299130 Alkaloid 7DLGT medium pass
Roff22430300820 Alkaloid 7DLGT low borderline
Roff22610303790 Alkaloid 7DLGT low borderline
Roff24020307910 Alkaloid 7DLGT low borderline
Roff24030308810 Alkaloid 7DLGT low borderline
Roff24030308820 Alkaloid 7DLGT low borderline
Roff24030308830 Alkaloid 7DLGT low borderline
Roff24080310300 Alkaloid 7DLGT low borderline
Roff24100311670 Alkaloid 7DLGT low borderline
Roff24100311700 Alkaloid 7DLGT low borderline
Roff24120312810 Alkaloid 7DLGT low borderline
Roff24120312820 Alkaloid 7DLGT low borderline
Roff24190316780 Alkaloid 7DLGT low borderline
Roff24220319400 Alkaloid 7DLGT low borderline
Roff24370321500 Alkaloid 7DLGT medium pass
Roff24450323020 Alkaloid 7DLGT low borderline
Roff24460324120 Alkaloid 7DLGT medium pass
Roff24850326980 Alkaloid 7DLGT low borderline
Roff25040332070 Alkaloid 7DLGT low borderline
Roff25070332590 Alkaloid 7DLGT medium pass
Roff25260340390 Alkaloid 7DLGT low borderline
Roff25260340470 Alkaloid 7DLGT low borderline
Roff25260340480 Alkaloid 7DLGT low borderline
Roff2650400352900 Alkaloid 7DLGT medium pass
Roff26760353890 Alkaloid 7DLGT medium pass
Roff26840355680 Alkaloid 7DLGT low borderline
Roff27000357080 Alkaloid 7DLGT low borderline
Roff27270358810 Alkaloid 7DLGT medium pass
Roff27430363200 Alkaloid 7DLGT low borderline
Roff27600363860 Alkaloid 7DLGT high pass
Roff27600363950 Alkaloid 7DLGT high pass
Roff27600363960 Alkaloid 7DLGT medium pass
Roff27600364100 Alkaloid 7DLGT high pass
Roff28080366750 Alkaloid 7DLGT medium pass
Roff2951930375060 Alkaloid 7DLGT low borderline