PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Roff3129010377970 Alkaloid 7DLGT low borderline
Roff3171080380700 Alkaloid 7DLGT medium pass
Roff3171100380750 Alkaloid 7DLGT low borderline
Roff3290760383850 Alkaloid 7DLGT medium pass
Roff3411300391110 Alkaloid 7DLGT low borderline
Roff3417100391780 Alkaloid 7DLGT low borderline
Roff3455630393900 Alkaloid 7DLGT low borderline
Roff3455630393910 Alkaloid 7DLGT low borderline
Roff3477330395820 Alkaloid 7DLGT low borderline
Roff3483420396680 Alkaloid 7DLGT medium pass
Roff3495050397680 Alkaloid 7DLGT medium pass
Roff3512600399980 Alkaloid 7DLGT low borderline
Roff3543830401700 Alkaloid 7DLGT low borderline
Roff3543970401710 Alkaloid 7DLGT low borderline
Roff3637770408620 Alkaloid 7DLGT medium pass
Roff3638960408920 Alkaloid 7DLGT medium pass
Roff3638960408950 Alkaloid 7DLGT medium pass
Roff3667650411770 Alkaloid 7DLGT low borderline
Roff3672350412620 Alkaloid 7DLGT low borderline
Roff3721330418020 Alkaloid 7DLGT low borderline
Roff3732230419290 Alkaloid 7DLGT medium pass
Roff3740330421010 Alkaloid 7DLGT low borderline
Roff3778130427520 Alkaloid 7DLGT low borderline
Roff3778130427530 Alkaloid 7DLGT low borderline
Roff3823400435950 Alkaloid 7DLGT medium pass
Roff3823400435960 Alkaloid 7DLGT low borderline
Roff3831020437970 Alkaloid 7DLGT medium pass
Roff3833650438710 Alkaloid 7DLGT low borderline
Roff3839220440090 Alkaloid 7DLGT low borderline
Roff3849610443240 Alkaloid 7DLGT medium pass
Roff3857000445110 Alkaloid 7DLGT low borderline
Roff3859310446020 Alkaloid 7DLGT medium pass
Roff3879950453390 Alkaloid 7DLGT medium pass
Roff3881500453580 Alkaloid 7DLGT medium pass
Roff3881500453600 Alkaloid 7DLGT medium pass
Roff3881500453710 Alkaloid 7DLGT low borderline
Roff3881500453840 Alkaloid 7DLGT low borderline
Roff3885380454820 Alkaloid 7DLGT high pass
Roff3885380454830 Alkaloid 7DLGT high pass
Roff3889290456580 Alkaloid 7DLGT high pass
Roff3889290456590 Alkaloid 7DLGT low borderline
Roff3919270471260 Alkaloid 7DLGT low borderline
Roff3938000478870 Alkaloid 7DLGT medium pass
Roff3942420480950 Alkaloid 7DLGT medium pass
Roff3963020482250 Alkaloid 7DLGT high pass
Roff3963030482270 Alkaloid 7DLGT high pass
Roff4090120482680 Alkaloid 7DLGT medium pass
Roff4106740482810 Alkaloid 7DLGT medium pass
Roff4947920485330 Alkaloid 7DLGT medium pass
Roff5343370486880 Alkaloid 7DLGT medium pass