PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff17220221930 Alkaloid TRI/TRII low borderline
Roff20060258450 Alkaloid TRI/TRII medium pass
Roff21810294140 Alkaloid TRI/TRII low borderline
Roff2221780296940 Alkaloid TRI/TRII medium pass
Roff2222660297590 Alkaloid TRI/TRII medium pass
Roff26350352100 Alkaloid TRI/TRII medium pass
Roff26350352140 Alkaloid TRI/TRII medium pass
Roff26350352150 Alkaloid TRI/TRII medium pass
Roff26350352160 Alkaloid TRI/TRII medium pass
Roff3507530399460 Alkaloid TRI/TRII medium pass
Roff3710900416910 Alkaloid TRI/TRII medium pass
Roff3720020417770 Alkaloid TRI/TRII medium pass
Roff3720130417790 Alkaloid TRI/TRII low borderline
Roff3720130417810 Alkaloid TRI/TRII low borderline
Roff3789070429650 Alkaloid TRI/TRII medium pass
Roff3862170446980 Alkaloid TRI/TRII low borderline
Roff3878650452940 Alkaloid TRI/TRII low borderline
Roff3892390458810 Alkaloid TRI/TRII low borderline
Roff3893570459240 Alkaloid TRI/TRII medium pass
Roff3893570459250 Alkaloid TRI/TRII medium pass
Roff3918470470960 Alkaloid TRI/TRII low borderline
Roff3934390477770 Alkaloid TRI/TRII medium pass
Roff10300036920 Alkaloid TYDC_DDC medium borderline
Roff10820083120 Alkaloid TYDC_DDC medium borderline
Roff12390136420 Alkaloid TYDC_DDC medium borderline
Roff12390136430 Alkaloid TYDC_DDC medium borderline
Roff12390136440 Alkaloid TYDC_DDC medium borderline
Roff12390136450 Alkaloid TYDC_DDC medium borderline
Roff13310165160 Alkaloid TYDC_DDC medium borderline
Roff23730304270 Alkaloid TYDC_DDC medium borderline
Roff23730304280 Alkaloid TYDC_DDC medium borderline
Roff3860410446450 Alkaloid TYDC_DDC low borderline
Roff5893180493290 Alkaloid TYDC_DDC low borderline
Roff5893190493320 Alkaloid TYDC_DDC low borderline
Roff8210506610 Alkaloid TYDC_DDC medium borderline
Roff8210506620 Alkaloid TYDC_DDC medium borderline
Roff10300043810 Alkaloid XMT_MXMT_DXMT low borderline
Roff10160004300 Flavonoid 4CL medium pass
Roff10170015390 Flavonoid 4CL low borderline
Roff10180015740 Flavonoid 4CL medium pass
Roff10230020240 Flavonoid 4CL medium pass
Roff10230020250 Flavonoid 4CL medium pass
Roff10230021440 Flavonoid 4CL medium pass
Roff10270030320 Flavonoid 4CL low borderline
Roff10520071130 Flavonoid 4CL medium pass
Roff10520071140 Flavonoid 4CL medium pass
Roff10590078860 Flavonoid 4CL low borderline
Roff10590078870 Flavonoid 4CL low borderline
Roff10590078880 Flavonoid 4CL low borderline
Roff10590078890 Flavonoid 4CL low borderline