PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff10590078900 Flavonoid 4CL low borderline
Roff10670081930 Flavonoid 4CL medium borderline
Roff11530117100 Flavonoid 4CL medium pass
Roff11530117110 Flavonoid 4CL medium pass
Roff11530117120 Flavonoid 4CL medium pass
Roff11860123260 Flavonoid 4CL medium pass
Roff11860123270 Flavonoid 4CL medium pass
Roff11860123280 Flavonoid 4CL medium pass
Roff11950125230 Flavonoid 4CL medium pass
Roff11950125240 Flavonoid 4CL medium pass
Roff12370135350 Flavonoid 4CL medium pass
Roff12500138740 Flavonoid 4CL medium pass
Roff12500138750 Flavonoid 4CL medium pass
Roff12500138760 Flavonoid 4CL medium pass
Roff12550139940 Flavonoid 4CL medium pass
Roff12670144120 Flavonoid 4CL low borderline
Roff13680171450 Flavonoid 4CL medium pass
Roff13680171460 Flavonoid 4CL medium pass
Roff13680171650 Flavonoid 4CL medium pass
Roff14340181660 Flavonoid 4CL medium pass
Roff14410185240 Flavonoid 4CL low borderline
Roff15090195260 Flavonoid 4CL low borderline
Roff15280197630 Flavonoid 4CL medium pass
Roff15280197640 Flavonoid 4CL medium pass
Roff15280197650 Flavonoid 4CL medium pass
Roff15400203210 Flavonoid 4CL low borderline
Roff15400203220 Flavonoid 4CL low borderline
Roff15400203230 Flavonoid 4CL low borderline
Roff15400203240 Flavonoid 4CL low borderline
Roff19230249880 Flavonoid 4CL medium pass
Roff19230249890 Flavonoid 4CL medium pass
Roff21180275590 Flavonoid 4CL medium pass
Roff21810292540 Flavonoid 4CL low borderline
Roff22220297230 Flavonoid 4CL low borderline
Roff22240298450 Flavonoid 4CL low borderline
Roff22530301590 Flavonoid 4CL medium pass
Roff22530301600 Flavonoid 4CL medium pass
Roff24020307560 Flavonoid 4CL medium pass
Roff24020307570 Flavonoid 4CL medium pass
Roff24160314270 Flavonoid 4CL low borderline
Roff24450323900 Flavonoid 4CL medium pass
Roff24450323910 Flavonoid 4CL medium pass
Roff24450323920 Flavonoid 4CL medium pass
Roff24960328030 Flavonoid 4CL medium pass
Roff25090332860 Flavonoid 4CL medium pass
Roff25220336570 Flavonoid 4CL medium pass
Roff26820355210 Flavonoid 4CL medium pass
Roff27430359820 Flavonoid 4CL low borderline
Roff2799070366430 Flavonoid 4CL low borderline
Roff2898070370900 Flavonoid 4CL medium pass