PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff3648970410370 Flavonoid F3H medium borderline
Roff3650330410450 Flavonoid F3H low borderline
Roff3703490415940 Flavonoid F3H low borderline
Roff3720390417870 Flavonoid F3H low borderline
Roff3743300421990 Flavonoid F3H medium borderline
Roff3748370422610 Flavonoid F3H medium borderline
Roff3810600433660 Flavonoid F3H medium borderline
Roff3835530439170 Flavonoid F3H medium borderline
Roff3844980441870 Flavonoid F3H medium borderline
Roff3844980441880 Flavonoid F3H medium borderline
Roff3858720445940 Flavonoid F3H medium borderline
Roff3870860450600 Flavonoid F3H medium borderline
Roff3894930460030 Flavonoid F3H medium borderline
Roff3894930460090 Flavonoid F3H medium borderline
Roff3899980462750 Flavonoid F3H medium borderline
Roff3906270466010 Flavonoid F3H medium borderline
Roff3906270466020 Flavonoid F3H medium borderline
Roff3912090468500 Flavonoid F3H medium borderline
Roff3923560473610 Flavonoid F3H medium borderline
Roff3930390476710 Flavonoid F3H medium borderline
Roff8210500540 Flavonoid F3H low borderline
Roff8210501070 Flavonoid F3H medium borderline
Roff8210501980 Flavonoid F3H medium borderline
Roff8210505580 Flavonoid F3H medium borderline
Roff8210506040 Flavonoid F3H low borderline
Roff8300509250 Flavonoid F3H medium borderline
Roff8300509260 Flavonoid F3H medium borderline
Roff8300509270 Flavonoid F3H medium borderline
Roff8300510430 Flavonoid F3H low borderline
Roff8300511620 Flavonoid F3H medium borderline
Roff8300511630 Flavonoid F3H medium borderline
Roff8300511640 Flavonoid F3H medium borderline
Roff11530116250 Flavonoid FLS medium borderline
Roff11790121850 Flavonoid FLS low borderline
Roff11860123610 Flavonoid FLS low borderline
Roff22530301990 Flavonoid FLS medium borderline
Roff3738690420820 Flavonoid FLS low borderline
Roff3741420421240 Flavonoid FLS low borderline
Roff3776740427120 Flavonoid FLS low borderline
Roff3798310431340 Flavonoid FLS low borderline
Roff10160006360 Flavonoid FNS medium borderline
Roff10170011250 Flavonoid FNS medium borderline
Roff10170014460 Flavonoid FNS medium borderline
Roff10170014480 Flavonoid FNS medium borderline
Roff10230020320 Flavonoid FNS medium borderline
Roff10420051250 Flavonoid FNS low borderline
Roff10420051260 Flavonoid FNS low borderline
Roff10420051270 Flavonoid FNS low borderline
Roff10490065340 Flavonoid FNS medium borderline
Roff11530109550 Flavonoid FNS medium borderline