PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff12670142010 Flavonoid FNS medium borderline
Roff13040157620 Flavonoid FNS low borderline
Roff15910211470 Flavonoid FNS medium borderline
Roff18260233670 Flavonoid FNS medium borderline
Roff19070247800 Flavonoid FNS low borderline
Roff19530254030 Flavonoid FNS medium borderline
Roff19690255270 Flavonoid FNS medium borderline
Roff19690255280 Flavonoid FNS medium borderline
Roff19690255290 Flavonoid FNS medium borderline
Roff20850269600 Flavonoid FNS low borderline
Roff20850270530 Flavonoid FNS medium borderline
Roff20880271080 Flavonoid FNS medium borderline
Roff20880271090 Flavonoid FNS medium borderline
Roff21440283660 Flavonoid FNS medium borderline
Roff26630353280 Flavonoid FNS medium borderline
Roff3412820391330 Flavonoid FNS medium borderline
Roff3593250405770 Flavonoid FNS low borderline
Roff3671720412410 Flavonoid FNS medium borderline
Roff3879270453000 Flavonoid FNS medium borderline
Roff5871460492900 Flavonoid FNS medium borderline
Roff5871470492920 Flavonoid FNS medium borderline
Roff10170013640 Flavonoid IFR low borderline
Roff10170014910 Flavonoid IFR high pass
Roff10240024500 Flavonoid IFR medium borderline
Roff10240024510 Flavonoid IFR medium borderline
Roff10290032100 Flavonoid IFR low borderline
Roff10300037380 Flavonoid IFR low borderline
Roff10350050400 Flavonoid IFR high pass
Roff10350050410 Flavonoid IFR high pass
Roff10420051090 Flavonoid IFR medium pass
Roff10460060690 Flavonoid IFR low borderline
Roff10460060700 Flavonoid IFR low borderline
Roff10510067300 Flavonoid IFR low borderline
Roff10590073320 Flavonoid IFR low borderline
Roff10590073330 Flavonoid IFR low borderline
Roff10590073340 Flavonoid IFR low borderline
Roff10590078600 Flavonoid IFR low borderline
Roff10910084140 Flavonoid IFR low borderline
Roff11250093090 Flavonoid IFR low borderline
Roff11370094920 Flavonoid IFR low borderline
Roff11370094930 Flavonoid IFR low borderline
Roff11530106940 Flavonoid IFR low borderline
Roff11530106950 Flavonoid IFR low borderline
Roff11890124350 Flavonoid IFR low borderline
Roff12120127970 Flavonoid IFR low borderline
Roff12350131880 Flavonoid IFR low borderline
Roff12350131890 Flavonoid IFR low borderline
Roff12390136400 Flavonoid IFR low borderline
Roff12390136410 Flavonoid IFR low borderline
Roff12410136690 Flavonoid IFR low borderline