PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff13310163930 Flavonoid IFR low borderline
Roff13310163940 Flavonoid IFR low borderline
Roff13310165460 Flavonoid IFR low borderline
Roff13310165480 Flavonoid IFR low borderline
Roff14320179100 Flavonoid IFR low borderline
Roff14410184710 Flavonoid IFR high pass
Roff14410185130 Flavonoid IFR low borderline
Roff14500187890 Flavonoid IFR low borderline
Roff14500187900 Flavonoid IFR low borderline
Roff14500187910 Flavonoid IFR low borderline
Roff14500187920 Flavonoid IFR low borderline
Roff14700193810 Flavonoid IFR low borderline
Roff14700193820 Flavonoid IFR low borderline
Roff20060258090 Flavonoid IFR low borderline
Roff20060258100 Flavonoid IFR low borderline
Roff20060258110 Flavonoid IFR low borderline
Roff21180275200 Flavonoid IFR low borderline
Roff24100311600 Flavonoid IFR low borderline
Roff24100312260 Flavonoid IFR low borderline
Roff24170314820 Flavonoid IFR high pass
Roff24190317670 Flavonoid IFR low borderline
Roff24470324600 Flavonoid IFR high pass
Roff24750326900 Flavonoid IFR high pass
Roff2800470366550 Flavonoid IFR low borderline
Roff2800470366560 Flavonoid IFR low borderline
Roff29180373160 Flavonoid IFR low borderline
Roff3411500391130 Flavonoid IFR low borderline
Roff3459090394500 Flavonoid IFR high pass
Roff3527130400760 Flavonoid IFR low borderline
Roff3527130400770 Flavonoid IFR low borderline
Roff3596450406130 Flavonoid IFR low borderline
Roff3637870408630 Flavonoid IFR low borderline
Roff3637910408670 Flavonoid IFR medium pass
Roff3773480426760 Flavonoid IFR low borderline
Roff3891010457260 Flavonoid IFR low borderline
Roff3895900460790 Flavonoid IFR low borderline
Roff3938170478930 Flavonoid IFR high pass
Roff3938330479390 Flavonoid IFR high pass
Roff8210505120 Flavonoid IFR low borderline
Roff8300508510 Flavonoid IFR high pass
Roff10160008020 Flavonoid IFS low borderline
Roff10170012910 Flavonoid IFS medium borderline
Roff10170013420 Flavonoid IFS medium borderline
Roff10170014470 Flavonoid IFS low borderline
Roff10230022960 Flavonoid IFS medium borderline
Roff10230022970 Flavonoid IFS low borderline
Roff10230022980 Flavonoid IFS low borderline
Roff10230022990 Flavonoid IFS low borderline
Roff10230023000 Flavonoid IFS low borderline
Roff10230023010 Flavonoid IFS low borderline