PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff10240023590 Flavonoid IFS medium borderline
Roff10240023600 Flavonoid IFS medium borderline
Roff10290032330 Flavonoid IFS low borderline
Roff10290032380 Flavonoid IFS low borderline
Roff10290032390 Flavonoid IFS low borderline
Roff10290032400 Flavonoid IFS low borderline
Roff10290032410 Flavonoid IFS low borderline
Roff10290032440 Flavonoid IFS low borderline
Roff10290032570 Flavonoid IFS low borderline
Roff10300042720 Flavonoid IFS low borderline
Roff10300044710 Flavonoid IFS low borderline
Roff10420052140 Flavonoid IFS low borderline
Roff10420052150 Flavonoid IFS low borderline
Roff10420052370 Flavonoid IFS medium borderline
Roff10420052690 Flavonoid IFS low borderline
Roff10420055490 Flavonoid IFS low borderline
Roff10440058840 Flavonoid IFS medium borderline
Roff10440059860 Flavonoid IFS low borderline
Roff10440060430 Flavonoid IFS low borderline
Roff10490065330 Flavonoid IFS medium borderline
Roff10590072470 Flavonoid IFS low borderline
Roff10590075580 Flavonoid IFS low borderline
Roff10590076240 Flavonoid IFS medium borderline
Roff10780082950 Flavonoid IFS low borderline
Roff10860083180 Flavonoid IFS low borderline
Roff10860083210 Flavonoid IFS low borderline
Roff10860083220 Flavonoid IFS low borderline
Roff10960085060 Flavonoid IFS low borderline
Roff10960085070 Flavonoid IFS low borderline
Roff10980085870 Flavonoid IFS medium borderline
Roff11010086420 Flavonoid IFS medium borderline
Roff11470099730 Flavonoid IFS medium borderline
Roff11510100090 Flavonoid IFS low borderline
Roff11520102380 Flavonoid IFS low borderline
Roff11520102390 Flavonoid IFS low borderline
Roff11530106120 Flavonoid IFS low borderline
Roff11530113880 Flavonoid IFS low borderline
Roff11640118590 Flavonoid IFS medium borderline
Roff11910124690 Flavonoid IFS medium borderline
Roff12350133310 Flavonoid IFS medium borderline
Roff12430137730 Flavonoid IFS medium borderline
Roff12430137770 Flavonoid IFS medium borderline
Roff12550138810 Flavonoid IFS low borderline
Roff12670141960 Flavonoid IFS medium borderline
Roff12680146170 Flavonoid IFS low borderline
Roff12680147150 Flavonoid IFS low borderline
Roff12720149560 Flavonoid IFS low borderline
Roff12840156080 Flavonoid IFS low borderline
Roff12840156090 Flavonoid IFS low borderline
Roff12880157150 Flavonoid IFS low borderline