PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff13060157650 Flavonoid IFS low borderline
Roff13130158730 Flavonoid IFS medium borderline
Roff13130159340 Flavonoid IFS low borderline
Roff13130159350 Flavonoid IFS low borderline
Roff13310162300 Flavonoid IFS low borderline
Roff13310164100 Flavonoid IFS low borderline
Roff13310164110 Flavonoid IFS low borderline
Roff13310164120 Flavonoid IFS low borderline
Roff13310164130 Flavonoid IFS low borderline
Roff13310164140 Flavonoid IFS low borderline
Roff13310164150 Flavonoid IFS low borderline
Roff13510168790 Flavonoid IFS low borderline
Roff13630170600 Flavonoid IFS low borderline
Roff14290178330 Flavonoid IFS low borderline
Roff14290178340 Flavonoid IFS low borderline
Roff14370182230 Flavonoid IFS low borderline
Roff14370182680 Flavonoid IFS medium borderline
Roff14370183240 Flavonoid IFS medium borderline
Roff14370184530 Flavonoid IFS low borderline
Roff14430186670 Flavonoid IFS low borderline
Roff14430186680 Flavonoid IFS low borderline
Roff14430187160 Flavonoid IFS medium borderline
Roff14430187170 Flavonoid IFS medium borderline
Roff14430187220 Flavonoid IFS medium borderline
Roff14430187230 Flavonoid IFS medium borderline
Roff14430187240 Flavonoid IFS medium borderline
Roff15280197570 Flavonoid IFS low borderline
Roff15360199200 Flavonoid IFS low borderline
Roff15360200160 Flavonoid IFS medium borderline
Roff15360201240 Flavonoid IFS low borderline
Roff15360202760 Flavonoid IFS medium borderline
Roff15360202770 Flavonoid IFS medium borderline
Roff15360202780 Flavonoid IFS medium borderline
Roff15410203600 Flavonoid IFS medium borderline
Roff15490204730 Flavonoid IFS low borderline
Roff15910210270 Flavonoid IFS low borderline
Roff15910211260 Flavonoid IFS medium borderline
Roff15910211450 Flavonoid IFS medium borderline
Roff15910211480 Flavonoid IFS medium borderline
Roff15910211490 Flavonoid IFS medium borderline
Roff15910211500 Flavonoid IFS medium borderline
Roff15910211510 Flavonoid IFS medium borderline
Roff15910211530 Flavonoid IFS medium borderline
Roff15910211540 Flavonoid IFS medium borderline
Roff16480215440 Flavonoid IFS low borderline
Roff16700218300 Flavonoid IFS low borderline
Roff16700218310 Flavonoid IFS low borderline
Roff17200220080 Flavonoid IFS medium borderline
Roff18070229490 Flavonoid IFS low borderline
Roff18070229820 Flavonoid IFS medium borderline