PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff18080230990 Flavonoid UFGT medium pass
Roff18080231000 Flavonoid UFGT high pass
Roff18080231020 Flavonoid UFGT high pass
Roff18080231030 Flavonoid UFGT medium pass
Roff18110231890 Flavonoid UFGT high pass
Roff18550240290 Flavonoid UFGT medium pass
Roff18940245370 Flavonoid UFGT medium pass
Roff18940245380 Flavonoid UFGT medium pass
Roff19480251940 Flavonoid UFGT high pass
Roff19480251960 Flavonoid UFGT medium pass
Roff20400261110 Flavonoid UFGT high pass
Roff20400261560 Flavonoid UFGT medium pass
Roff21180274540 Flavonoid UFGT medium pass
Roff21180274550 Flavonoid UFGT high pass
Roff21180274560 Flavonoid UFGT high pass
Roff21540286810 Flavonoid UFGT high pass
Roff21540286820 Flavonoid UFGT low borderline
Roff21540286830 Flavonoid UFGT medium pass
Roff21810293300 Flavonoid UFGT medium pass
Roff21810293310 Flavonoid UFGT medium pass
Roff2223600298030 Flavonoid UFGT high pass
Roff2223600298040 Flavonoid UFGT medium pass
Roff22310299090 Flavonoid UFGT medium pass
Roff22310299110 Flavonoid UFGT medium pass
Roff22310299120 Flavonoid UFGT medium pass
Roff22310299130 Flavonoid UFGT medium pass
Roff22610303790 Flavonoid UFGT medium pass
Roff24020307910 Flavonoid UFGT medium pass
Roff24030308810 Flavonoid UFGT medium pass
Roff24030308820 Flavonoid UFGT medium pass
Roff24030308830 Flavonoid UFGT medium pass
Roff24080310300 Flavonoid UFGT high pass
Roff24100311670 Flavonoid UFGT medium pass
Roff24100311700 Flavonoid UFGT high pass
Roff24120312810 Flavonoid UFGT medium pass
Roff24120312820 Flavonoid UFGT high pass
Roff24190316780 Flavonoid UFGT medium pass
Roff24220319400 Flavonoid UFGT medium pass
Roff24370321500 Flavonoid UFGT medium pass
Roff24450323020 Flavonoid UFGT low borderline
Roff24460324120 Flavonoid UFGT medium pass
Roff24850326980 Flavonoid UFGT medium pass
Roff25040332070 Flavonoid UFGT medium pass
Roff25070332590 Flavonoid UFGT high pass
Roff25260340390 Flavonoid UFGT high pass
Roff25260340470 Flavonoid UFGT high pass
Roff25260340480 Flavonoid UFGT high pass
Roff2650400352900 Flavonoid UFGT medium pass
Roff26760353890 Flavonoid UFGT high pass
Roff26840355680 Flavonoid UFGT medium pass