PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff27000357080 Flavonoid UFGT medium pass
Roff27270358810 Flavonoid UFGT medium pass
Roff27430363200 Flavonoid UFGT medium pass
Roff27600363860 Flavonoid UFGT medium pass
Roff27600363950 Flavonoid UFGT medium pass
Roff27600363960 Flavonoid UFGT medium pass
Roff27600364100 Flavonoid UFGT medium pass
Roff28080366750 Flavonoid UFGT high pass
Roff2951930375060 Flavonoid UFGT high pass
Roff3129010377970 Flavonoid UFGT medium pass
Roff3171080380700 Flavonoid UFGT medium pass
Roff3171100380750 Flavonoid UFGT medium pass
Roff3290760383850 Flavonoid UFGT high pass
Roff3411300391110 Flavonoid UFGT medium pass
Roff3417100391780 Flavonoid UFGT medium pass
Roff3455630393900 Flavonoid UFGT high pass
Roff3455630393910 Flavonoid UFGT high pass
Roff3477330395820 Flavonoid UFGT medium pass
Roff3483420396680 Flavonoid UFGT low borderline
Roff3495050397680 Flavonoid UFGT medium pass
Roff3512600399980 Flavonoid UFGT medium pass
Roff3543830401700 Flavonoid UFGT low borderline
Roff3543970401710 Flavonoid UFGT medium pass
Roff3637770408620 Flavonoid UFGT medium pass
Roff3638960408920 Flavonoid UFGT high pass
Roff3638960408950 Flavonoid UFGT medium pass
Roff3667650411770 Flavonoid UFGT medium pass
Roff3672350412620 Flavonoid UFGT high pass
Roff3721330418020 Flavonoid UFGT high pass
Roff3723170418360 Flavonoid UFGT low borderline
Roff3732230419290 Flavonoid UFGT medium pass
Roff3740330421010 Flavonoid UFGT medium pass
Roff3778130427520 Flavonoid UFGT medium pass
Roff3778130427530 Flavonoid UFGT medium pass
Roff3823400435950 Flavonoid UFGT medium pass
Roff3823400435960 Flavonoid UFGT medium pass
Roff3831020437970 Flavonoid UFGT medium pass
Roff3833650438710 Flavonoid UFGT high pass
Roff3839220440090 Flavonoid UFGT high pass
Roff3849610443240 Flavonoid UFGT medium pass
Roff3857000445110 Flavonoid UFGT medium pass
Roff3859310446020 Flavonoid UFGT medium pass
Roff3870080450280 Flavonoid UFGT low borderline
Roff3879950453390 Flavonoid UFGT high pass
Roff3881500453580 Flavonoid UFGT medium pass
Roff3881500453600 Flavonoid UFGT high pass
Roff3881500453710 Flavonoid UFGT medium pass
Roff3881500453840 Flavonoid UFGT high pass
Roff3885380454820 Flavonoid UFGT high pass
Roff3885380454830 Flavonoid UFGT high pass