PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2162
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Roff3776110427020 Flavonoid F3'H/CYP75B medium borderline
Roff3783850428910 Flavonoid F3'H/CYP75B low borderline
Roff3829910437560 Flavonoid F3'H/CYP75B low borderline
Roff3841980440550 Flavonoid F3'H/CYP75B medium borderline
Roff3850460443470 Flavonoid F3'H/CYP75B medium borderline
Roff3891950458560 Flavonoid F3'H/CYP75B medium borderline
Roff3926400474700 Flavonoid F3'H/CYP75B low borderline
Roff3929580476340 Flavonoid F3'H/CYP75B low borderline
Roff3938330479630 Flavonoid F3'H/CYP75B medium borderline
Roff5661200487360 Flavonoid F3'H/CYP75B medium borderline
Roff5661210487390 Flavonoid F3'H/CYP75B medium borderline
Roff5851630492410 Flavonoid F3'H/CYP75B medium borderline
Roff5851640492430 Flavonoid F3'H/CYP75B medium borderline
Roff8110495300 Flavonoid F3'H/CYP75B medium borderline
Roff8110495540 Flavonoid F3'H/CYP75B medium borderline
Roff8110498260 Flavonoid F3'H/CYP75B low borderline
Roff10160005120 Flavonoid F3H low borderline
Roff10160008010 Flavonoid F3H medium borderline
Roff10300037290 Flavonoid F3H low borderline
Roff10300037720 Flavonoid F3H low borderline
Roff10300040490 Flavonoid F3H medium borderline
Roff10300041220 Flavonoid F3H medium borderline
Roff10300044140 Flavonoid F3H medium borderline
Roff10300044150 Flavonoid F3H medium borderline
Roff10510068580 Flavonoid F3H medium borderline
Roff10590078810 Flavonoid F3H medium pass
Roff10980085850 Flavonoid F3H medium borderline
Roff11110089830 Flavonoid F3H medium borderline
Roff11520102400 Flavonoid F3H medium borderline
Roff11530116220 Flavonoid F3H low borderline
Roff11530116240 Flavonoid F3H low borderline
Roff11530116260 Flavonoid F3H low borderline
Roff11530116270 Flavonoid F3H low borderline
Roff11730119910 Flavonoid F3H medium borderline
Roff11730120000 Flavonoid F3H medium borderline
Roff12670142520 Flavonoid F3H medium borderline
Roff12730152760 Flavonoid F3H medium borderline
Roff13310165310 Flavonoid F3H medium pass
Roff13310165530 Flavonoid F3H medium borderline
Roff13310165540 Flavonoid F3H medium borderline
Roff14370184540 Flavonoid F3H medium borderline
Roff14410185500 Flavonoid F3H low borderline
Roff14530189870 Flavonoid F3H low borderline
Roff15360200560 Flavonoid F3H medium borderline
Roff15360202440 Flavonoid F3H low borderline
Roff15360202450 Flavonoid F3H low borderline
Roff15910210810 Flavonoid F3H low borderline
Roff15950213440 Flavonoid F3H low borderline
Roff16480215310 Flavonoid F3H medium pass
Roff16480215320 Flavonoid F3H low borderline