PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff27430362460 Rosmarinic Acid C4H low borderline
Roff27960366130 Rosmarinic Acid C4H low borderline
Roff28570368770 Rosmarinic Acid C4H low borderline
Roff28570368780 Rosmarinic Acid C4H medium pass
Roff28570368800 Rosmarinic Acid C4H low borderline
Roff28570368970 Rosmarinic Acid C4H low borderline
Roff2894150370150 Rosmarinic Acid C4H low borderline
Roff2894870370260 Rosmarinic Acid C4H low borderline
Roff2896650370450 Rosmarinic Acid C4H low borderline
Roff2896650370460 Rosmarinic Acid C4H low borderline
Roff2897600370590 Rosmarinic Acid C4H low borderline
Roff2921900373280 Rosmarinic Acid C4H low borderline
Roff2924320373320 Rosmarinic Acid C4H low borderline
Roff2926030373600 Rosmarinic Acid C4H medium pass
Roff2953410375140 Rosmarinic Acid C4H medium pass
Roff2953410375150 Rosmarinic Acid C4H medium pass
Roff2976730375750 Rosmarinic Acid C4H low borderline
Roff3081320377030 Rosmarinic Acid C4H low borderline
Roff3104540377700 Rosmarinic Acid C4H medium pass
Roff3137290378300 Rosmarinic Acid C4H medium pass
Roff3236230381310 Rosmarinic Acid C4H low borderline
Roff3247400381970 Rosmarinic Acid C4H medium pass
Roff3259240382750 Rosmarinic Acid C4H low borderline
Roff3263170383060 Rosmarinic Acid C4H medium pass
Roff3265680383210 Rosmarinic Acid C4H low borderline
Roff3297100384370 Rosmarinic Acid C4H low borderline
Roff3303940385080 Rosmarinic Acid C4H low borderline
Roff3323720386280 Rosmarinic Acid C4H medium pass
Roff3332220387460 Rosmarinic Acid C4H medium pass
Roff3393790390530 Rosmarinic Acid C4H low borderline
Roff3409990391050 Rosmarinic Acid C4H medium pass
Roff3417090391760 Rosmarinic Acid C4H medium pass
Roff3421910392160 Rosmarinic Acid C4H low borderline
Roff3421910392170 Rosmarinic Acid C4H medium pass
Roff3453600393490 Rosmarinic Acid C4H low borderline
Roff3464490394950 Rosmarinic Acid C4H low borderline
Roff3480840396120 Rosmarinic Acid C4H low borderline
Roff3480840396130 Rosmarinic Acid C4H low borderline
Roff3498240398370 Rosmarinic Acid C4H low borderline
Roff3534660400950 Rosmarinic Acid C4H low borderline
Roff3541250401240 Rosmarinic Acid C4H low borderline
Roff3541250401250 Rosmarinic Acid C4H medium pass
Roff3555760402200 Rosmarinic Acid C4H low borderline
Roff3557590402320 Rosmarinic Acid C4H medium pass
Roff3557620402330 Rosmarinic Acid C4H low borderline
Roff3577990404420 Rosmarinic Acid C4H medium pass
Roff3612280407130 Rosmarinic Acid C4H low borderline
Roff3622040407610 Rosmarinic Acid C4H low borderline
Roff3632770408260 Rosmarinic Acid C4H low borderline
Roff3637950408790 Rosmarinic Acid C4H medium pass