PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff3632770408260 Steroid DWF4/CYP90B1 low borderline
Roff3669610412160 Steroid DWF4/CYP90B1 low borderline
Roff3671720412400 Steroid DWF4/CYP90B1 low borderline
Roff3671720412410 Steroid DWF4/CYP90B1 low borderline
Roff3702730415590 Steroid DWF4/CYP90B1 low borderline
Roff3702730415600 Steroid DWF4/CYP90B1 low borderline
Roff3707840416590 Steroid DWF4/CYP90B1 low borderline
Roff3723010418290 Steroid DWF4/CYP90B1 low borderline
Roff3738110420660 Steroid DWF4/CYP90B1 medium borderline
Roff3759400424480 Steroid DWF4/CYP90B1 low borderline
Roff3768710426060 Steroid DWF4/CYP90B1 low borderline
Roff3768710426070 Steroid DWF4/CYP90B1 low borderline
Roff3776110427010 Steroid DWF4/CYP90B1 low borderline
Roff3811970434160 Steroid DWF4/CYP90B1 medium borderline
Roff3811970434180 Steroid DWF4/CYP90B1 medium borderline
Roff3829910437560 Steroid DWF4/CYP90B1 low borderline
Roff3835820439240 Steroid DWF4/CYP90B1 medium borderline
Roff3850460443470 Steroid DWF4/CYP90B1 medium pass
Roff3879270452990 Steroid DWF4/CYP90B1 low borderline
Roff3881500453650 Steroid DWF4/CYP90B1 low borderline
Roff3881500453660 Steroid DWF4/CYP90B1 low borderline
Roff3900160462960 Steroid DWF4/CYP90B1 medium borderline
Roff3900160462970 Steroid DWF4/CYP90B1 medium borderline
Roff3900160462990 Steroid DWF4/CYP90B1 low borderline
Roff3929580476340 Steroid DWF4/CYP90B1 low borderline
Roff3936650478590 Steroid DWF4/CYP90B1 medium borderline
Roff5851610492350 Steroid DWF4/CYP90B1 low borderline
Roff5851620492390 Steroid DWF4/CYP90B1 low borderline
Roff5851620492400 Steroid DWF4/CYP90B1 low borderline
Roff5871460492900 Steroid DWF4/CYP90B1 low borderline
Roff5871470492920 Steroid DWF4/CYP90B1 low borderline
Roff8110495380 Steroid DWF4/CYP90B1 low borderline
Roff8110495390 Steroid DWF4/CYP90B1 low borderline
Roff8110498870 Steroid DWF4/CYP90B1 low borderline
Roff12210129800 Steroid DWF5 medium pass
Roff14370183640 Steroid DWF5 medium borderline
Roff14370183650 Steroid DWF5 medium pass
Roff10420055670 Steroid DWF7 medium pass
Roff27850365480 Steroid DWF7 medium pass
Roff11520102760 Steroid FK high pass
Roff24030308460 Steroid FK medium borderline
Roff24030308470 Steroid FK medium borderline
Roff24030308480 Steroid FK medium pass
Roff24030308490 Steroid FK medium pass
Roff3936850478640 Steroid HYD1 high pass
Roff3936850478650 Steroid HYD1 medium pass
Roff10230023010 Steroid ROT3/CYP90C1 medium borderline
Roff10290031740 Steroid ROT3/CYP90C1 low borderline
Roff10300036130 Steroid ROT3/CYP90C1 low borderline
Roff10420052140 Steroid ROT3/CYP90C1 medium borderline