PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Roff10420052150 Steroid ROT3/CYP90C1 medium borderline
Roff10960085070 Steroid ROT3/CYP90C1 medium borderline
Roff12350133970 Steroid ROT3/CYP90C1 low borderline
Roff13510168790 Steroid ROT3/CYP90C1 medium borderline
Roff14290178330 Steroid ROT3/CYP90C1 low borderline
Roff15910210270 Steroid ROT3/CYP90C1 medium borderline
Roff26200349720 Steroid ROT3/CYP90C1 medium borderline
Roff26200349730 Steroid ROT3/CYP90C1 medium borderline
Roff10300044910 Steroid SMO1/SMO2 medium pass
Roff10490063270 Steroid SMO1/SMO2 medium pass
Roff16660217290 Steroid SMO1/SMO2 medium pass
Roff23680303880 Steroid SMO1/SMO2 low borderline
Roff3248590382290 Steroid SMO1/SMO2 medium pass
Roff3339140388450 Steroid SMO1/SMO2 medium pass
Roff3411570391160 Steroid SMO1/SMO2 medium pass
Roff3411570391170 Steroid SMO1/SMO2 medium pass
Roff3864500447850 Steroid SMO1/SMO2 medium pass
Roff10160005090 Steroid SMT1/SMT2/SMT3 low borderline
Roff10160005820 Steroid SMT1/SMT2/SMT3 medium pass
Roff10160005830 Steroid SMT1/SMT2/SMT3 medium pass
Roff10240024120 Steroid SMT1/SMT2/SMT3 medium pass
Roff10300033710 Steroid SMT1/SMT2/SMT3 medium pass
Roff10300039450 Steroid SMT1/SMT2/SMT3 low borderline
Roff10590072950 Steroid SMT1/SMT2/SMT3 medium pass
Roff11470098520 Steroid SMT1/SMT2/SMT3 low borderline
Roff11470098530 Steroid SMT1/SMT2/SMT3 low borderline
Roff11520100780 Steroid SMT1/SMT2/SMT3 low borderline
Roff11530113390 Steroid SMT1/SMT2/SMT3 low borderline
Roff12420136810 Steroid SMT1/SMT2/SMT3 medium pass
Roff12550138890 Steroid SMT1/SMT2/SMT3 low borderline
Roff12730151620 Steroid SMT1/SMT2/SMT3 medium pass
Roff12730151630 Steroid SMT1/SMT2/SMT3 medium pass
Roff13630170490 Steroid SMT1/SMT2/SMT3 low borderline
Roff14160177010 Steroid SMT1/SMT2/SMT3 low borderline
Roff14320180140 Steroid SMT1/SMT2/SMT3 medium pass
Roff14320180150 Steroid SMT1/SMT2/SMT3 medium pass
Roff14320180300 Steroid SMT1/SMT2/SMT3 medium pass
Roff15360198790 Steroid SMT1/SMT2/SMT3 low borderline
Roff16390214970 Steroid SMT1/SMT2/SMT3 medium pass
Roff18100231190 Steroid SMT1/SMT2/SMT3 medium pass
Roff18450236280 Steroid SMT1/SMT2/SMT3 medium pass
Roff18450237610 Steroid SMT1/SMT2/SMT3 medium pass
Roff18450238100 Steroid SMT1/SMT2/SMT3 low borderline
Roff19240250270 Steroid SMT1/SMT2/SMT3 low borderline
Roff19530253270 Steroid SMT1/SMT2/SMT3 medium pass
Roff19530253280 Steroid SMT1/SMT2/SMT3 medium pass
Roff19530253290 Steroid SMT1/SMT2/SMT3 low borderline
Roff19920256080 Steroid SMT1/SMT2/SMT3 low borderline
Roff19920256090 Steroid SMT1/SMT2/SMT3 low borderline
Roff20850270840 Steroid SMT1/SMT2/SMT3 low borderline