PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff3810600433660 Alkaloid CODM/T6ODM medium borderline
Roff3835530439170 Alkaloid CODM/T6ODM medium borderline
Roff3844980441870 Alkaloid CODM/T6ODM medium borderline
Roff3844980441880 Alkaloid CODM/T6ODM medium borderline
Roff3870860450600 Alkaloid CODM/T6ODM medium borderline
Roff3899980462750 Alkaloid CODM/T6ODM medium borderline
Roff3906270466010 Alkaloid CODM/T6ODM medium borderline
Roff3906270466020 Alkaloid CODM/T6ODM medium borderline
Roff3912090468500 Alkaloid CODM/T6ODM medium borderline
Roff3923560473610 Alkaloid CODM/T6ODM medium borderline
Roff3930390476710 Alkaloid CODM/T6ODM medium borderline
Roff8210505580 Alkaloid CODM/T6ODM medium borderline
Roff8210506040 Alkaloid CODM/T6ODM medium borderline
Roff8300509250 Alkaloid CODM/T6ODM medium borderline
Roff8300509260 Alkaloid CODM/T6ODM medium borderline
Roff8300509270 Alkaloid CODM/T6ODM medium borderline
Roff8300511620 Alkaloid CODM/T6ODM medium borderline
Roff8300511630 Alkaloid CODM/T6ODM medium borderline
Roff8300511640 Alkaloid CODM/T6ODM medium borderline
Roff10160006430 Alkaloid COR medium pass
Roff10510068090 Alkaloid COR low borderline
Roff11530104860 Alkaloid COR medium pass
Roff11530104870 Alkaloid COR low borderline
Roff15260197060 Alkaloid COR medium pass
Roff18760243000 Alkaloid COR medium pass
Roff21630288370 Alkaloid COR medium pass
Roff21630288380 Alkaloid COR medium pass
Roff3351210389520 Alkaloid COR medium pass
Roff11470096030 Alkaloid CYP719 medium borderline
Roff3329910387210 Alkaloid CYP719 low borderline
Roff3329910387220 Alkaloid CYP719 low borderline
Roff3329910387240 Alkaloid CYP719 low borderline
Roff10230020320 Alkaloid CYP80B1 medium borderline
Roff12670142010 Alkaloid CYP80B1 medium borderline
Roff20210259840 Alkaloid CYP80B1 medium borderline
Roff24470324260 Alkaloid CYP80B1 medium borderline
Roff24470324370 Alkaloid CYP80B1 medium borderline
Roff3827340436910 Alkaloid CYP80B1 medium borderline
Roff3870510450480 Alkaloid CYP80B1 medium borderline
Roff3921180472560 Alkaloid CYP80B1 medium borderline
Roff19280250340 Alkaloid CYP80F1 medium borderline
Roff19800255560 Alkaloid CYP80F1 medium borderline
Roff20590264630 Alkaloid CYP80F1 medium borderline
Roff27430361500 Alkaloid CYP80F1 medium borderline
Roff10160006380 Alkaloid G8O/G8H medium borderline
Roff10420052880 Alkaloid G8O/G8H medium pass
Roff10490065340 Alkaloid G8O/G8H medium borderline
Roff11530109560 Alkaloid G8O/G8H medium borderline
Roff12430137720 Alkaloid G8O/G8H medium borderline
Roff12550138810 Alkaloid G8O/G8H low borderline